Basic Information
Locus ID:
CH05.2213
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 18103879 | 18110989 | - | CH05.2213 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.05 | 104,660.00 Da | 40.16 | 99.32 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 617 | 895 | 5.89535E-86 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 66 | 6.1E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 613 | 890 | 2.7E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 596 | 912 | 1.64E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 391 | 1.17E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 182 | 290 | 2.1E-23 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 181 | 2.2E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 699 | 914 | 3.0E-57 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 582 | 698 | 2.5E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 402 | 3.0E-13 | IPR032675 |
| SMART | SM00220 | serkin_6 | 611 | 895 | 1.9E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 611 | 895 | 37.46006 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 743 | 755 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 617 | 639 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G06840.1 | Leucine-rich repeat protein kinase family protein. | 2.47E-248 |
| RefSeq | XP_025809295.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Panicum hallii] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 2.38E-247 | |
| TrEMBL | A0A2S3HB33 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_3G238100 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology