Basic Information
Locus ID:
CH05.2193
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 17942389 | 17948113 | + | CH05.2193 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.19 | 104,634.71 Da | 30.01 | 91.81 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 645 | 909 | 1.01734E-95 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 642 | 907 | 1.5E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 620 | 913 | 1.32E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 67 | 420 | 9.01E-52 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 611 | 714 | 1.1E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 291 | 391 | 1.8E-14 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 189 | 290 | 3.4E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 33 | 188 | 2.8E-43 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 715 | 923 | 9.6E-57 | - |
| SMART | SM00220 | serkin_6 | 639 | 912 | 2.0E-32 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 271 | 293 | 8.073888 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 639 | 912 | 39.537758 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 645 | 667 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 758 | 770 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 5.17E-269 |
| RefSeq | XP_039837810.1 | leucine-rich repeat receptor protein kinase HPCA1-like [Panicum virgatum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 2.48E-206 | |
| TrEMBL | A0A8T0UX76 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_3KG376921 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology