halophFGD

Basic Information

Locus ID: CH05.2087

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Removal of H(2)O(2), oxidation of toxic reductants, biosynthesis and degradation of lignin, suberization, auxin catabolism, response to environmental stresses such as wounding, pathogen attack and oxidative stress

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH05	17023169	17035208	-	CH05.2087

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.68	237,408.31 Da	54.16	77.15	-0.40

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd00693	secretory_peroxidase	869	1131	1.15573E-121	IPR033905
Pfam	PF05699	hAT family C-terminal dimerisation region	1852	1918	7.4E-9	IPR008906
Pfam	PF00141	Peroxidase	893	1132	1.8E-61	IPR002016
Pfam	PF04937	Protein of unknown function (DUF 659)	1471	1623	9.0E-47	IPR007021
SUPERFAMILY	SSF53098	Ribonuclease H-like	1493	1920	2.28E-47	IPR012337
SUPERFAMILY	SSF48113	Heme-dependent peroxidases	2120	2166	9.53E-7	IPR010255
SUPERFAMILY	SSF48113	Heme-dependent peroxidases	870	1134	1.62E-76	IPR010255
Gene3D	G3DSA:1.10.520.10	-	874	1004	6.5E-88	-
Gene3D	G3DSA:1.10.420.10	Peroxidase, domain 2	1005	1131	6.5E-88	-
Gene3D	G3DSA:1.10.520.10	-	2147	2163	3.6E-6	-
Gene3D	G3DSA:1.10.420.10	Peroxidase, domain 2	2119	2146	3.6E-6	-
ProSiteProfiles	PS50873	Plant heme peroxidase family profile.	869	1135	60.807804	IPR002016
PRINTS	PR00458	Haem peroxidase superfamily signature	961	978	5.5E-21	IPR002016
PRINTS	PR00461	Plant peroxidase signature	960	970	1.8E-33	IPR000823
PRINTS	PR00458	Haem peroxidase superfamily signature	1027	1042	5.5E-21	IPR002016
PRINTS	PR00458	Haem peroxidase superfamily signature	1095	1110	5.5E-21	IPR002016
PRINTS	PR00458	Haem peroxidase superfamily signature	979	991	5.5E-21	IPR002016
PRINTS	PR00461	Plant peroxidase signature	1026	1038	1.8E-33	IPR000823
PRINTS	PR00461	Plant peroxidase signature	1093	1108	1.8E-33	IPR000823
PRINTS	PR00461	Plant peroxidase signature	879	898	1.8E-33	IPR000823
PRINTS	PR00461	Plant peroxidase signature	941	954	1.8E-33	IPR000823
PRINTS	PR00461	Plant peroxidase signature	1109	1126	1.8E-33	IPR000823
PRINTS	PR00461	Plant peroxidase signature	979	994	1.8E-33	IPR000823
PRINTS	PR00461	Plant peroxidase signature	903	923	1.8E-33	IPR000823
PRINTS	PR00458	Haem peroxidase superfamily signature	901	915	5.5E-21	IPR002016
MobiDBLite	mobidb-lite	consensus disorder prediction	315	329	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1194	1216	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1360	1375	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	696	740	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1129	1158	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	675	748	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	2015	2070	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	315	382	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1350	1375	-	-

Gene Ontology

Biological Process:

GO:0006979 (response to oxidative stress) GO:0042744 (hydrogen peroxide catabolic process)

Molecular Function:

GO:0004601 (peroxidase activity) GO:0020037 (heme binding) GO:0046983 (protein dimerization activity)

KEGG Pathway

KO Term:

K00430 (peroxidase [EC:1.11.1.7])

Pathway:

ko00940 (Phenylpropanoid biosynthesis) map00940 (Phenylpropanoid biosynthesis) ko01100 (Metabolic pathways) map01100 (Metabolic pathways) ko01110 (Biosynthesis of secondary metabolites) map01110 (Biosynthesis of secondary metabolites)

Reaction:

R00602 (Methanol + Hydrogen peroxide <=> Formaldehyde + 2 H2O) R02596 (Coniferyl alcohol <=> Guaiacyl lignin) R03919 (Sinapyl alcohol <=> Syringyl lignin) R04007 (4-Coumaryl alcohol <=> p-Hydroxyphenyl lignin) R07443 (5-Hydroxyconiferyl alcohol <=> 5-Hydroxy-guaiacyl lignin)

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT1G05260.1	Peroxidase superfamily protein. Encodes a cold-inducible cationic peroxidase that is involved in the stress response. In response to low temperature, RCI3 transcripts accumulate in the aerial part and in roots of etiolated seedlings but only in roots of light-grown seedlings.	3.06E-73
RefSeq	XP_008649623.2	uncharacterized protein LOC103630337 [Zea mays]	0
Swiss-Prot	O23044	Peroxidase 3 OS=Arabidopsis thaliana OX=3702 GN=PER3 PE=2 SV=1	2.95E-72
TrEMBL	A0A8T0T8G3	BED-type domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_4NG292738 PE=4 SV=1	4.06E-297

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	6	BH01.4753, BH06.686, BH08.2468, BH08.2472, CH05.2087 ... CH08.2411
Poaceae	Eleusine coracana subsp. coracana	3	gene-QOZ80_1BG0056120, gene-QOZ80_4BG0351070 ... gene-QOZ80_7BG0592000
Poaceae	Lolium multiflorum	2	gene-QYE76_048311, gene-QYE76_055843
Poaceae	Paspalum vaginatum	15	gene-BS78_03G023900, gene-BS78_03G199100, gene-BS78_K224500 ... gene-BS78_03G250900, gene-BS78_04G016800, gene-BS78_04G229600, gene-BS78_05G118200, gene-BS78_05G123700, gene-BS78_06G072600, gene-BS78_07G013200, gene-BS78_07G129300, gene-BS78_07G226100, gene-BS78_09G104400, gene-BS78_10G173100, gene-BS78_K296400
Poaceae	Sporobolus alterniflorus	11	Chr03G013220, Chr03G013230, Chr03G013240, Chr05G004880 ... Chr06G026060, Chr0G030480, Chr15G009020, Chr16G008190, Chr24G005950, Chr25G015130, Chr31G003770