Basic Information
Locus ID:
CH05.2057
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 16755873 | 16757141 | - | CH05.2057 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.26 | 46,540.06 Da | 45.59 | 84.43 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 27 | 57 | 3.4E-4 | IPR001810 |
| Pfam | PF08268 | F-box associated domain | 244 | 325 | 2.1E-5 | IPR013187 |
| SUPERFAMILY | SSF81383 | F-box domain | 13 | 77 | 1.96E-10 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 21 | 59 | 3.9E-6 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 129 | 332 | 1.6E-23 | IPR017451 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G47790.1 | F-box and associated interaction domains-containing protein. | 2.37E-9 |
| RefSeq | XP_012700658.1 | putative F-box protein At2g02030 [Setaria italica] | 1.38E-156 |
| Q9FZF8 | Putative F-box protein At1g47790 OS=Arabidopsis thaliana OX=3702 GN=At1g47790 PE=4 SV=1 | 2.35E-8 | |
| TrEMBL | A0A5J9TRI1 | F-box domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_37416 PE=4 SV=1 | 7.62E-160 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology