Basic Information
Locus ID:
CH05.2017
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Extension to Ser/Thr-type protein kinases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 16382201 | 16388690 | - | CH05.2017 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 64,426.91 Da | 47.44 | 67.95 | -0.80 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05599 | STKc_NDR_like | 114 | 485 | 0.0 | - |
| Pfam | PF00069 | Protein kinase domain | 318 | 421 | 9.5E-22 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 117 | 269 | 1.5E-43 | IPR000719 |
| Pfam | PF00433 | Protein kinase C terminal domain | 440 | 484 | 3.0E-5 | IPR017892 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 90 | 473 | 3.64E-89 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 114 | 199 | 1.1E-64 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 200 | 277 | 1.1E-64 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 317 | 439 | 1.2E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 440 | 450 | 1.2E-45 | - |
| SMART | SM00220 | serkin_6 | 116 | 421 | 3.9E-109 | IPR000719 |
| SMART | SM00133 | pkinase_C_6 | 422 | 486 | 5.0E-7 | IPR000961 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 116 | 421 | 48.187767 | IPR000719 |
| ProSiteProfiles | PS51285 | AGC-kinase C-terminal domain profile. | 422 | 494 | 14.171783 | IPR000961 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 122 | 145 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 235 | 247 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 47 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 305 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 502 | 557 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 536 | 550 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 305 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G14350.3 | AGC (cAMP-dependent, cGMP-dependent and protein kinase C) kinase family protein. | 2.31E-268 |
| RefSeq | XP_039837616.1 | serine/threonine-protein kinase tricornered-like [Panicum virgatum] | 0 |
| Q9Y2H1 | Serine/threonine-protein kinase 38-like OS=Homo sapiens OX=9606 GN=STK38L PE=1 SV=3 | 4.25E-139 | |
| TrEMBL | A0A8T0UWA6 | Non-specific serine/threonine protein kinase OS=Panicum virgatum OX=38727 GN=PVAP13_3KG356000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology