Basic Information
Locus ID:
CH05.1989
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 16188472 | 16188999 | - | CH05.1989 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.42 | 18,940.63 Da | 63.01 | 73.14 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 27 | 102 | 5.3E-14 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 26 | 101 | 1.97E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 21 | 102 | 1.0E-18 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 7 | 62 | 1.0E-18 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 175 | 11.156687 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 106 | 175 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 131 | 148 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 157 | 175 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12680.1 | phosphoenolpyruvate carboxylase-related kinase 2. | 1.16E-26 |
| RefSeq | XP_039854438.1 | serine/threonine-protein kinase PEPKR2-like isoform X2 [Panicum virgatum] | 1.82E-34 |
| Q8W490 | Serine/threonine-protein kinase PEPKR2 OS=Arabidopsis thaliana OX=3702 GN=PEPKR2 PE=2 SV=1 | 1.14E-25 | |
| TrEMBL | A0A8T0R1G3 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6NG277500 PE=3 SV=1 | 2.84E-34 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
No orthogroup found for CH05.1989.