Basic Information
Locus ID:
CH05.1953
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 15897970 | 15900992 | - | CH05.1953 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.57 | 68,397.09 Da | 61.66 | 74.56 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 301 | 550 | 9.80965E-113 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 297 | 550 | 5.8E-59 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 280 | 550 | 2.97E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 595 | 1.9E-59 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 283 | 377 | 5.0E-19 | - |
| SMART | SM00220 | serkin_6 | 294 | 556 | 8.5E-62 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 294 | 556 | 41.474117 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 418 | 430 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 374 | 387 | 2.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 412 | 430 | 2.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 458 | 468 | 2.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 477 | 499 | 2.4E-17 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 521 | 543 | 2.4E-17 | IPR001245 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 82 | 107 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 206 | 220 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 46 | 121 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 165 | 254 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G58950.1 | Protein kinase superfamily protein. | 2.04E-136 |
| RefSeq | XP_034586879.1 | serine/threonine/tyrosine-protein kinase HT1-like [Setaria viridis] | 0 |
| Q2MHE4 | Serine/threonine/tyrosine-protein kinase HT1 OS=Arabidopsis thaliana OX=3702 GN=HT1 PE=1 SV=1 | 9.25E-101 | |
| TrEMBL | A0A4U6VAG0 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G180400v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology