Basic Information
Locus ID:
CH05.1927
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 15677280 | 15680565 | + | CH05.1927 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.32 | 111,434.61 Da | 37.67 | 97.67 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 708 | 1000 | 3.09374E-89 | - |
| Pfam | PF13855 | Leucine rich repeat | 306 | 365 | 8.2E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 483 | 543 | 2.8E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 160 | 218 | 1.7E-7 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 44 | 82 | 7.7E-8 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 706 | 997 | 9.1E-40 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 72 | 415 | 1.77E-63 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 701 | 999 | 1.31E-67 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 309 | 599 | 2.51E-48 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 302 | 418 | 5.0E-28 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 199 | 301 | 3.0E-27 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 788 | 1022 | 2.5E-59 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 419 | 620 | 3.2E-49 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 687 | 787 | 9.1E-17 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 42 | 198 | 4.0E-40 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 133 | 157 | 230.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 530 | 554 | 230.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 702 | 1022 | 4.0E-24 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 255 | 279 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 506 | 529 | 4.9 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 352 | 376 | 50.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 182 | 206 | 28.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 702 | 1008 | 36.018391 | IPR000719 |
| ProSiteProfiles | PS51257 | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 27 | 5.0 | - |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 849 | 861 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 708 | 737 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 307 | 320 | 1.1E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 506 | 519 | 1.1E-5 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 3.15E-114 |
| RefSeq | XP_004961447.1 | receptor-like protein kinase HSL1 [Setaria italica] | 0 |
| C0LGX3 | LRR receptor-like serine/threonine-protein kinase HSL2 OS=Arabidopsis thaliana OX=3702 GN=HSL2 PE=1 SV=1 | 9.25E-71 | |
| TrEMBL | K3Z3D8 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101765233 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology