Basic Information
Locus ID:
CH05.1622
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
cyclin-dependent protein serine/threonine kinase activity
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 13328987 | 13330003 | + | CH05.1622 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.79 | 36,271.50 Da | 42.96 | 78.91 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 40 | 310 | 2.0E-52 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 27 | 314 | 1.24E-65 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 32 | 130 | 9.1E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 131 | 327 | 1.4E-46 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 40 | 310 | 37.884079 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 23 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G67580.1 | Protein kinase superfamily protein. | 1.72E-37 |
| RefSeq | XP_039806363.1 | putative cyclin-dependent kinase F-2 [Panicum virgatum] | 1.14E-147 |
| Q2QSL4 | Putative cyclin-dependent kinase F-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CDKF-2 PE=3 SV=1 | 3.17E-57 | |
| TrEMBL | A0A2S3GPE4 | Protein kinase domain-containing protein OS=Panicum hallii OX=206008 GN=PAHAL_1G149000 PE=4 SV=1 | 1.86E-148 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology