Basic Information
Locus ID:
CH05.1492
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 12114911 | 12116273 | + | CH05.1492 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.93 | 45,027.45 Da | 62.83 | 86.00 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 41 | 75 | 1.4E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 31 | 76 | 9.03E-12 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 23 | 82 | 5.3E-9 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 39 | 75 | 9.868391 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 38 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015642425.2 | LOW QUALITY PROTEIN: uncharacterized protein LOC107275542 [Oryza sativa Japonica Group] | 1.36E-56 |
| TrEMBL | A0A4U6VCB8 | F-box domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_3G123100v2 PE=4 SV=1 | 2.84E-136 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||