Basic Information
Locus ID:
CH05.1322
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 10713316 | 10724415 | - | CH05.1322 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.30 | 62,692.37 Da | 34.00 | 94.59 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 247 | 515 | 1.6E-37 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 66 | 6.4E-11 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 71 | 129 | 2.6E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 191 | 6.38E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 220 | 518 | 5.6E-70 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 320 | 535 | 1.0E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 203 | 2.8E-51 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 216 | 319 | 4.4E-33 | - |
| SMART | SM00220 | serkin_6 | 243 | 518 | 1.2E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 243 | 529 | 32.96545 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 249 | 271 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 366 | 378 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 4.39E-138 |
| RefSeq | XP_034586484.1 | protein NSP-INTERACTING KINASE 3-like [Setaria viridis] | 2.45E-240 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 4.24E-137 | |
| TrEMBL | A0A1E5VN51 | Protein NSP-INTERACTING KINASE 3 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0012433 PE=3 SV=1 | 5.16E-246 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology