Basic Information
Locus ID:
CH05.1320
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 10693499 | 10700872 | - | CH05.1320 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.48 | 73,100.52 Da | 36.08 | 92.95 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 36 | 77 | 2.1E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 105 | 163 | 4.5E-8 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 340 | 610 | 4.2E-41 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 321 | 613 | 4.05E-72 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 37 | 213 | 1.26E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 416 | 632 | 8.9E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 311 | 415 | 1.5E-34 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 35 | 215 | 2.6E-40 | IPR032675 |
| SMART | SM00220 | serkin_6 | 339 | 612 | 2.8E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 339 | 623 | 35.438896 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 462 | 474 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 345 | 367 | - | IPR017441 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 129 | 142 | 9.9E-6 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 150 | 163 | 9.9E-6 | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G60800.1 | NSP-interacting kinase 3. | 5.91E-138 |
| RefSeq | XP_034586483.1 | protein NSP-INTERACTING KINASE 3-like [Setaria viridis] | 1.12E-247 |
| Q93ZS4 | Protein NSP-INTERACTING KINASE 3 OS=Arabidopsis thaliana OX=3702 GN=NIK3 PE=1 SV=1 | 5.71E-137 | |
| TrEMBL | A0A2T7E8S6 | Protein kinase domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_3G127300 PE=3 SV=1 | 4.17E-240 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||