Basic Information
Locus ID:
CH05.1319
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
ribosomal protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 10675010 | 10679021 | + | CH05.1319 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.73 | 41,850.80 Da | 63.56 | 67.58 | -0.41 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | G3DSA:3.30.1140.32 | - | 1 | 38 | 4.4E-7 | IPR036419 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 148 | 162 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 67 | 212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 90 | 104 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 212 | - | - |
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53870.1 | Ribosomal protein S3 family protein. | 2.32E-8 |
| RefSeq | XP_021654330.1 | 40S ribosomal protein S3-3-like [Hevea brasiliensis] | 1.28E-8 |
| Q9M339 | Small ribosomal subunit protein uS3y OS=Arabidopsis thaliana OX=3702 GN=RPS3B PE=1 SV=1 | 2.28E-7 | |
| TrEMBL | A0A835KWB2 | Uncharacterized protein OS=Digitaria exilis OX=1010633 GN=HU200_002785 PE=4 SV=1 | 1.09E-22 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||