HalophFGD

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Basic Information
Locus ID: CH05.1223
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
CH05 9764496 9768289 - CH05.1223
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
5.58 48,478.89 Da 40.28 95.17 -0.06
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF03478 Protein of unknown function (DUF295) 361 391 1.9E-7 IPR005174
SUPERFAMILY SSF81383 F-box domain 117 175 4.58E-6 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_044439738.1 uncharacterized protein LOC123166045 [Triticum aestivum] 7.35E-11
TrEMBL A0A3L6RC33 DUF295 domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM06G06610 PE=4 SV=1 1.97E-138
Expression
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BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 3 AH05.1023, BH05.1073, CH05.1223
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.