halophFGD

Basic Information

Locus ID: CH05.1139

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description:

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH05	9168733	9170650	-	CH05.1139

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.89	60,942.37 Da	51.68	70.11	-0.43

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	42	57	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	57	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	39	-	-

Best hit

Source	Best Hit ID	Description	E-value
TrEMBL	A0A3L6QTG6	LsmAD domain-containing protein OS=Panicum miliaceum OX=4540 GN=C2845_PM04G06800 PE=4 SV=1	7.51E-11

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	38	AH01.2411, AH01.4053, AH02.2969, AH03.2983, AH03.3482 ... AH04.2168, AH06.1173, AH08.999, AH09.537, BH03.2058, BH04.426, BH05.3451, BH05.741, BH08.1003, CH01.3769, CH01.5060, CH02.2241, CH02.2449, CH03.1722, CH03.3505, CH03.4729, CH03.8, CH04.1398, CH04.2284, CH04.622, CH05.1139, CH05.2408, CH05.2903, CH05.3274, CH05.4118, CH06.1882, CH08.2427, CH08.2782, CH08.766, CH09.130, CH09.3180, CH09.404, CH09.641
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0033440.1.CDS1 ... HORVU.MOREX.r3.4HG0412720.1.CDS1, HORVU.MOREX.r3.5HG0425570.1.CDS1, HORVU.MOREX.r3.7HG0667800.1.CDS1
Poaceae	Lolium multiflorum	11	gene-QYE76_001489, gene-QYE76_002749, gene-QYE76_005337 ... gene-QYE76_006069, gene-QYE76_015759, gene-QYE76_026176, gene-QYE76_026545, gene-QYE76_034785, gene-QYE76_039367, gene-QYE76_066465, gene-QYE76_067977
Poaceae	Oryza coarctata	11	Oco01G004580, Oco02G011290, Oco04G017380, Oco06G018880 ... Oco07G011460, Oco09G008340, Oco11G000620, Oco13G002610, Oco16G007020, Oco22G009350, Oco24G004440
Poaceae	Oryza sativa	2	LOC_Os04g10890.1, LOC_Os04g47030.1
Poaceae	Paspalum vaginatum	21	gene-BS78_01G375300, gene-BS78_02G114900, gene-BS78_K171700 ... gene-BS78_03G065900, gene-BS78_03G158000, gene-BS78_04G086200, gene-BS78_04G324700, gene-BS78_05G028000, gene-BS78_05G093400, gene-BS78_05G171000, gene-BS78_05G212100, gene-BS78_07G089300, gene-BS78_07G152400, gene-BS78_08G164700, gene-BS78_09G111900, gene-BS78_10G109100, gene-BS78_10G157000, gene-BS78_K215100, gene-BS78_K261200, gene-BS78_K284800, gene-BS78_K333900
Poaceae	Puccinellia tenuiflora	8	Pt_Chr0100538, Pt_Chr0103384, Pt_Chr0200373, Pt_Chr0305788 ... Pt_Chr0504634, Pt_Chr0505848, Pt_Chr0602815, Pt_Chr0604111
Poaceae	Sporobolus alterniflorus	104	Chr01G021880, Chr01G022060, Chr02G016330, Chr02G017390 ... Chr02G020590, Chr02G025200, Chr03G003810, Chr03G006920, Chr03G008040, Chr03G012410, Chr03G013380, Chr04G009130, Chr04G015410, Chr05G007550, Chr05G021150, Chr05G024850, Chr05G030530, Chr06G000770, Chr06G019070, Chr06G019080, Chr06G023450, Chr06G024050, Chr06G025660, Chr06G031580, Chr07G008660, Chr07G016630, Chr07G018320, Chr07G018470, Chr07G023170, Chr08G013330, Chr08G018100, Chr09G007850, Chr09G011380, Chr0G006060, Chr10G013700, Chr10G020240, Chr11G016410, Chr11G018670, Chr11G018680, Chr12G015200, Chr12G026390, Chr12G033140, Chr13G004490, Chr13G014980, Chr13G018070, Chr14G006840, Chr14G007730, Chr14G009620, Chr15G007310, Chr15G016590, Chr15G018160, Chr16G002280, Chr16G003750, Chr16G012450, Chr16G013450, Chr17G005410, Chr17G006200, Chr17G014260, Chr18G004510, Chr18G007630, Chr20G004680, Chr20G005800, Chr20G006250, Chr20G009020, Chr21G011550, Chr21G012860, Chr22G003720, Chr22G003730, Chr22G011380, Chr22G011930, Chr22G012430, Chr23G015670, Chr23G017930, Chr23G019440, Chr24G005360, Chr24G007250, Chr24G008440, Chr25G009660, Chr25G014270, Chr25G014330, Chr25G015030, Chr26G003910, Chr27G001640, Chr27G001650, Chr27G001920, Chr27G003410, Chr27G007890, Chr28G006730, Chr28G009700, Chr29G006940, Chr29G011740, Chr29G011750, Chr30G010560, Chr30G011210, Chr30G015190, Chr30G015840, Chr30G015850, Chr31G002250, Chr31G002260, Chr31G003120, Chr31G003160, Chr31G004970, Chr31G005210, Chr31G006250
Poaceae	Triticum aestivum	2	TraesCS1D02G347600.1.cds1, TraesCS3A02G333800.1
Poaceae	Zea mays	29	Zm00001eb029240_P001, Zm00001eb050450_P001 ... Zm00001eb054780_P001, Zm00001eb059440_P001, Zm00001eb087850_P001, Zm00001eb091020_P001, Zm00001eb099660_P001, Zm00001eb107790_P001, Zm00001eb112050_P001, Zm00001eb112190_P002, Zm00001eb118380_P001, Zm00001eb118390_P001, Zm00001eb131610_P001, Zm00001eb133620_P001, Zm00001eb158410_P001, Zm00001eb195810_P002, Zm00001eb235030_P001, Zm00001eb235540_P001, Zm00001eb250840_P001, Zm00001eb261750_P001, Zm00001eb261780_P001, Zm00001eb292070_P001, Zm00001eb311130_P001, Zm00001eb324580_P001, Zm00001eb356800_P001, Zm00001eb357400_P001, Zm00001eb388420_P001, Zm00001eb408840_P001, Zm00001eb416460_P001