Basic Information
Locus ID:
CH05.1024
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase; unclassified specificity.
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH05 | 8267211 | 8276223 | + | CH05.1024 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.81 | 128,982.85 Da | 50.09 | 83.89 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 406 | 671 | 1.20921E-86 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 29 | 246 | 2.03854E-61 | IPR001220 |
| CDD | cd14066 | STKc_IRAK | 872 | 1136 | 1.32051E-96 | - |
| Pfam | PF00069 | Protein kinase domain | 401 | 606 | 3.0E-46 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 870 | 1076 | 2.3E-45 | IPR000719 |
| Pfam | PF00139 | Legume lectin domain | 27 | 253 | 7.7E-42 | IPR001220 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 25 | 260 | 4.1E-52 | IPR013320 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 843 | 1139 | 1.75E-81 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 384 | 700 | 4.51E-75 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 479 | 690 | 3.1E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 360 | 478 | 3.4E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 942 | 1147 | 6.0E-57 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 25 | 253 | 3.5E-55 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 838 | 941 | 9.9E-35 | - |
| SMART | SM00220 | serkin_6 | 400 | 679 | 4.5E-33 | IPR000719 |
| SMART | SM00220 | serkin_6 | 866 | 1142 | 8.8E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 866 | 1142 | 37.940617 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 400 | 680 | 37.742741 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 406 | 429 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 988 | 1000 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 872 | 894 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 523 | 535 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 246 | 267 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 799 | 821 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1194 | 1212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 798 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 844 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1193 | 1212 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 253 | 267 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G03140.1 | Concanavalin A-like lectin protein kinase family protein. | 4.17E-209 |
| RefSeq | XP_039799082.1 | L-type lectin-domain containing receptor kinase VIII.2-like [Panicum virgatum] | 0 |
| Q9LYX1 | L-type lectin-domain containing receptor kinase VIII.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK82 PE=2 SV=1 | 4.01E-208 | |
| TrEMBL | A0A1D6FV58 | Receptor-like kinase LIP2 OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d010971 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology