Basic Information
Locus ID:
CH04.984
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 12704107 | 12714309 | + | CH04.984 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.84 | 218,265.23 Da | 55.83 | 73.51 | -0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13952 | Domain of unknown function (DUF4216) | 1243 | 1308 | 7.0E-13 | IPR025312 |
| Pfam | PF02992 | Transposase family tnp2 | 596 | 799 | 1.9E-82 | IPR004242 |
| Pfam | PF03492 | SAM dependent carboxyl methyltransferase | 11 | 212 | 1.2E-61 | IPR005299 |
| Pfam | PF13960 | Domain of unknown function (DUF4218) | 983 | 1089 | 1.2E-37 | IPR025452 |
| Pfam | PF13963 | Transposase-associated domain | 331 | 404 | 1.2E-17 | IPR029480 |
| SUPERFAMILY | SSF53335 | S-adenosyl-L-methionine-dependent methyltransferases | 24 | 213 | 1.31E-56 | IPR029063 |
| Gene3D | G3DSA:3.40.50.150 | Vaccinia Virus protein VP39 | 10 | 209 | 1.2E-56 | - |
| Gene3D | G3DSA:1.10.1200.270 | - | 11 | 208 | 1.2E-56 | IPR042086 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1496 | 1537 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1481 | 1495 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1467 | 1549 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1420 | 1452 | - | - |
| Coils | Coil | Coil | 1855 | 1889 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G11480.1 | S-adenosyl-L-methionine-dependent methyltransferases superfamily protein. The gene encodes a SABATH methyltransferase that methylates both salicylic acid and benzoic acid. It is highly expressed in flowers, induced by biotic and abiotic stress and thought to be involved in direct defense mechanism. | 9.51E-36 |
| RefSeq | XP_039778865.1 | uncharacterized protein LOC120646298 [Panicum virgatum] | 0 |
| D9J100 | Anthranilate O-methyltransferase 3 OS=Zea mays OX=4577 GN=AAMT3 PE=1 SV=1 | 1.11E-68 | |
| TrEMBL | Q53KV8 | Transposon protein, putative, CACTA, En/Spm sub-class, expressed OS=Oryza sativa subsp. japonica OX=39947 GN=LOC_Os11g06570 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 46 | AH01.2619, AH01.3243, AH02.2591, AH02.744, AH03.1151 ... |
| Poaceae | Lolium multiflorum | 13 | gene-QYE76_005385, gene-QYE76_005912, gene-QYE76_006405 ... |