Basic Information
Locus ID:
CH04.942
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 11910630 | 11914075 | - | CH04.942 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.77 | 45,712.79 Da | 30.74 | 91.42 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 92 | 359 | 2.07511E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 89 | 289 | 3.5E-45 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 66 | 357 | 1.48E-77 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 162 | 373 | 5.5E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 56 | 161 | 1.8E-33 | - |
| SMART | SM00220 | serkin_6 | 86 | 333 | 2.2E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 86 | 358 | 36.159733 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 208 | 220 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 92 | 114 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16670.1 | Protein kinase superfamily protein. | 1.66E-144 |
| RefSeq | XP_004972634.1 | cold-responsive protein kinase 1 [Setaria italica] | 6.49E-235 |
| Q93YN1 | Cold-responsive protein kinase 1 OS=Arabidopsis thaliana OX=3702 GN=CRPK1 PE=1 SV=1 | 1.6E-143 | |
| TrEMBL | K3YI94 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101768435 PE=3 SV=1 | 1.47E-233 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology