Basic Information
Locus ID:
CH04.920
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 11566426 | 11577505 | - | CH04.920 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.25 | 92,624.10 Da | 43.70 | 92.86 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 38 | 299 | 8.4E-43 | IPR000719 |
| Pfam | PF00069 | Protein kinase domain | 394 | 659 | 3.0E-50 | IPR000719 |
| Pfam | PF00635 | MSP (Major sperm protein) domain | 683 | 774 | 7.4E-8 | IPR000535 |
| SUPERFAMILY | SSF49354 | PapD-like | 680 | 806 | 9.94E-14 | IPR008962 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 24 | 304 | 2.83E-64 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 379 | 665 | 3.24E-71 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 485 | 678 | 6.6E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 129 | 318 | 1.3E-41 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 679 | 806 | 6.3E-16 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 16 | 110 | 1.6E-21 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 373 | 467 | 2.1E-21 | - |
| SMART | SM00220 | serkin_6 | 37 | 307 | 1.0E-28 | IPR000719 |
| SMART | SM00220 | serkin_6 | 394 | 660 | 3.8E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 37 | 307 | 31.481377 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 681 | 802 | 14.034801 | IPR000535 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 394 | 672 | 35.990124 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 525 | 537 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 43 | 65 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23150.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 7. Encodes a cysteine-rich receptor-like protein kinase. | 1.13E-50 |
| RefSeq | XP_039822995.1 | putative cysteine-rich receptor-like protein kinase 32 isoform X1 [Panicum virgatum] | 0 |
| Q8L7G3 | Cysteine-rich receptor-like protein kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=2 SV=1 | 1.11E-49 | |
| TrEMBL | A0A8T0P4F1 | Protein kinase domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_8NG252400 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | BH05.3525, CH04.920, CH05.3680, Contig522.28 |
| Poaceae | Eleusine coracana subsp. coracana | 5 | gene-QOZ80_5AG0380720, gene-QOZ80_5BG0439080 ... |
| Poaceae | Hordeum vulgare | 2 | HORVU.MOREX.r3.3HG0225170.1, HORVU.MOREX.r3.7HG0748020.1 |
| Poaceae | Lolium multiflorum | 4 | gene-QYE76_036867, gene-QYE76_036876, gene-QYE76_036884 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_06G051900, gene-BS78_08G093000 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0401585 |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G157900, Tel7E01G940400 |
| Poaceae | Triticum dicoccoides | 7 | gene_TRIDC3AG004390, gene_TRIDC7AG075260 ... |
| Poaceae | Triticum aestivum | 20 | TraesCS3A02G073900.1, TraesCS3D02G522300.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb164620_P001 |