Basic Information
Locus ID:
CH04.512
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 5062494 | 5064284 | - | CH04.512 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.66 | 24,436.24 Da | 56.74 | 82.12 | -0.05 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 81 | 158 | 1.7E-18 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 81 | 214 | 5.66E-24 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 55 | 216 | 1.9E-22 | - |
| SMART | SM00220 | serkin_6 | 25 | 207 | 2.7E-5 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 207 | 16.244926 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G51850.3 | - | 1.06E-45 |
| RefSeq | XP_025794993.1 | calcium-dependent protein kinase 8 [Panicum hallii] | 5.46E-48 |
| Q75GE8 | Calcium-dependent protein kinase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=CPK8 PE=2 SV=1 | 7.38E-47 | |
| TrEMBL | A0A2T7BZE0 | Calcium-dependent protein kinase OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_9G039300 PE=4 SV=1 | 1.24E-46 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||