Basic Information
Locus ID:
CH04.475
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
WD40-like Beta Propeller Repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 4611764 | 4616970 | - | CH04.475 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.15 | 113,950.18 Da | 48.25 | 59.20 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 720 | 732 | 0.12 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 872 | 886 | 0.0021 | IPR011659 |
| Pfam | PF07676 | WD40-like Beta Propeller Repeat | 931 | 946 | 0.023 | IPR011659 |
| SUPERFAMILY | SSF82171 | DPP6 N-terminal domain-like | 516 | 946 | 2.09E-28 | - |
| Gene3D | G3DSA:2.120.10.30 | - | 499 | 696 | 2.9E-7 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 898 | 1045 | 7.7E-8 | IPR011042 |
| Gene3D | G3DSA:2.120.10.30 | - | 708 | 897 | 2.5E-19 | IPR011042 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 162 | 365 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 168 | 204 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 408 | 456 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21680.1 | DPP6 N-terminal domain-like protein. | 4.52E-92 |
| RefSeq | XP_052149423.1 | uncharacterized protein LOC127767970 [Oryza glaberrima] | 2.87E-305 |
| TrEMBL | A0A0E0KCY0 | Protein TolB OS=Oryza punctata OX=4537 PE=4 SV=1 | 1.99E-305 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology