Basic Information
Locus ID:
CH04.443
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein of unknown function, DUF594
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 4221991 | 4222485 | + | CH04.443 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.10 | 19,159.23 Da | 40.13 | 95.61 | 0.27 |
Protein Domain:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_012704019.1 | uncharacterized protein LOC101765912 [Setaria italica] | 6.69E-68 |
| TrEMBL | A0A0A9Q4E8 | DUF4220 domain-containing protein OS=Arundo donax OX=35708 PE=4 SV=1 | 7.35E-72 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.443 |
| Poaceae | Eleusine coracana subsp. coracana | 1 | gene-QOZ80_9AG0671370 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.1HG0093960.1.CDS1 |
| Poaceae | Lolium multiflorum | 3 | gene-QYE76_046376, gene-QYE76_064692, gene-QYE76_064712 |
| Poaceae | Oryza coarctata | 2 | Oco21G002200, Oco21G008550 |
| Poaceae | Oryza sativa | 6 | LOC_Os10g31290.1, LOC_Os11g06990.1, LOC_Os11g40340.1 ... |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G074800, gene-BS78_K288000, gene-BS78_K313600 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0702477 |
| Poaceae | Sporobolus alterniflorus | 1 | Chr23G018960 |
| Poaceae | Thinopyrum elongatum | 2 | Tel1E01G662700, Tel7E01G209900 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC1AG063390, gene_TRIDC1AG063420 ... |
| Poaceae | Triticum aestivum | 16 | TraesCS1A02G401400.1, TraesCS1A02G432100.1 ... |