Basic Information
Locus ID:
CH04.309
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Salt stress response/antifungal
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 2634178 | 2639357 | + | CH04.309 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.83 | 97,684.98 Da | 42.36 | 83.99 | -0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 408 | 571 | 5.4E-25 | IPR000719 |
| Pfam | PF01657 | Salt stress response/antifungal | 41 | 139 | 2.5E-16 | IPR002902 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 617 | 883 | 3.8E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 599 | 886 | 6.47E-68 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 324 | 590 | 1.05E-51 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 597 | 688 | 1.7E-20 | - |
| Gene3D | G3DSA:3.30.430.20 | - | 33 | 141 | 1.5E-16 | IPR038408 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 690 | 891 | 9.7E-54 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 403 | 586 | 1.8E-45 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 316 | 402 | 1.9E-15 | - |
| SMART | SM00220 | serkin_6 | 334 | 574 | 6.1E-13 | IPR000719 |
| SMART | SM00220 | serkin_6 | 615 | 885 | 6.3E-25 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 335 | 578 | 21.474506 | IPR000719 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 35 | 142 | 15.411651 | IPR002902 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 615 | 891 | 35.806381 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 621 | 642 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 734 | 746 | - | IPR008271 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 424 | 436 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 251 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 308 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G53380.1 | Concanavalin A-like lectin protein kinase family protein. | 9.66E-60 |
| RefSeq | XP_004516072.1 | L-type lectin-domain containing receptor kinase IX.1-like [Cicer arietinum] | 3.35E-73 |
| Q9LFH9 | L-type lectin-domain containing receptor kinase VIII.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK81 PE=2 SV=1 | 9.46E-59 | |
| TrEMBL | A0A1E5W0P5 | L-type lectin-domain containing receptor kinase VIII.1 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0008049 PE=4 SV=1 | 6.49E-134 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 3 | BH05.601, CH01.3028, CH04.309 |
| Poaceae | Lolium multiflorum | 6 | gene-QYE76_003593, gene-QYE76_017906, gene-QYE76_019077 ... |
| Poaceae | Oryza coarctata | 1 | Oco09G005110 |
| Poaceae | Oryza sativa | 1 | LOC_Os10g10540.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_05G170900, gene-BS78_08G007300 |
| Poaceae | Puccinellia tenuiflora | 5 | Pt_Chr0106389, Pt_Chr0106422, Pt_Chr0501231, Pt_Chr0604613 ... |
| Poaceae | Sporobolus alterniflorus | 2 | Chr09G007730, Chr13G017140 |
| Poaceae | Thinopyrum elongatum | 8 | Tel1E01G497600, Tel2E01G092800, Tel2E01G1016400 ... |
| Poaceae | Triticum aestivum | 6 | TraesCS2B02G628100.1, TraesCS2B02G628200.1 ... |