Basic Information
Locus ID:
CH04.280
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the pyruvate kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 2277222 | 2284979 | - | CH04.280 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.39 | 156,859.73 Da | 30.81 | 96.58 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13812 | Pentatricopeptide repeat domain | 947 | 1002 | 1.4E-5 | IPR002885 |
| Pfam | PF13041 | PPR repeat family | 818 | 867 | 3.5E-17 | IPR002885 |
| Pfam | PF02887 | Pyruvate kinase, alpha/beta domain | 395 | 519 | 7.3E-23 | IPR015795 |
| Pfam | PF12854 | PPR repeat | 777 | 808 | 1.4E-13 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 713 | 730 | 0.3 | IPR002885 |
| Pfam | PF00224 | Pyruvate kinase, barrel domain | 30 | 375 | 7.8E-89 | IPR015793 |
| Pfam | PF13041 | PPR repeat family | 888 | 929 | 6.3E-13 | IPR002885 |
| Pfam | PF13041 | PPR repeat family | 1274 | 1317 | 3.2E-8 | IPR002885 |
| Pfam | PF12854 | PPR repeat | 1130 | 1162 | 5.1E-12 | IPR002885 |
| Pfam | PF12854 | PPR repeat | 1165 | 1196 | 1.6E-14 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 1066 | 1096 | 0.018 | IPR002885 |
| Pfam | PF13041 | PPR repeat family | 1203 | 1252 | 3.4E-13 | IPR002885 |
| Pfam | PF12854 | PPR repeat | 1025 | 1057 | 1.2E-12 | IPR002885 |
| SUPERFAMILY | SSF81901 | HCP-like | 936 | 1277 | 1.26E-8 | - |
| SUPERFAMILY | SSF52935 | PK C-terminal domain-like | 358 | 522 | 2.09E-22 | IPR036918 |
| SUPERFAMILY | SSF50800 | PK beta-barrel domain-like | 96 | 186 | 3.49E-6 | IPR011037 |
| SUPERFAMILY | SSF51621 | Phosphoenolpyruvate/pyruvate domain | 9 | 375 | 9.07E-74 | IPR015813 |
| Gene3D | G3DSA:3.40.1380.20 | - | 371 | 513 | 2.4E-147 | IPR036918 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 1103 | 1251 | 1.2E-37 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 850 | 936 | 7.6E-32 | IPR011990 |
| Gene3D | G3DSA:3.20.20.60 | - | 30 | 370 | 2.4E-147 | IPR040442 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 937 | 1093 | 6.2E-45 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 625 | 770 | 1.6E-15 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 771 | 849 | 7.8E-23 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 1252 | 1407 | 1.6E-27 | IPR011990 |
| Gene3D | G3DSA:2.40.33.10 | - | 96 | 202 | 2.4E-147 | IPR015806 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 1311 | 1344 | 3.3E-4 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 748 | 782 | 2.2E-5 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 856 | 890 | 9.4E-7 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 1206 | 1237 | 6.4E-7 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 892 | 925 | 8.0E-11 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 1031 | 1065 | 1.2E-8 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 783 | 812 | 3.3E-7 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 1066 | 1099 | 1.0E-4 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 1242 | 1274 | 3.4E-8 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 962 | 994 | 3.8E-4 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 1136 | 1170 | 1.2E-8 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 821 | 855 | 1.8E-8 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 1276 | 1308 | 4.8E-4 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 997 | 1030 | 4.4E-6 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 1171 | 1203 | 7.9E-11 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 1103 | 1135 | 6.8E-5 | IPR002885 |
| TIGRFAM | TIGR01064 | pyruv_kin: pyruvate kinase | 30 | 516 | 2.0E-105 | IPR001697 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 926 | 959 | 9.7E-5 | IPR002885 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 713 | 745 | 5.4E-4 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 1309 | 1343 | 10.281757 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 854 | 888 | 11.893068 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 1204 | 1238 | 11.257313 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 710 | 744 | 8.747175 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 959 | 993 | 10.687325 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 745 | 780 | 10.862706 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 1029 | 1063 | 12.945353 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 1169 | 1203 | 14.743006 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 1239 | 1273 | 10.413293 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 1064 | 1098 | 10.698286 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 994 | 1028 | 11.147699 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 924 | 958 | 11.257313 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 819 | 853 | 12.199985 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 781 | 815 | 11.750571 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 1099 | 1133 | 9.799459 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 1134 | 1168 | 12.495939 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 1274 | 1308 | 11.366925 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 889 | 923 | 14.10725 | IPR002885 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 253 | 279 | 1.0E-41 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 348 | 364 | 1.0E-41 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 85 | 101 | 1.0E-41 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 280 | 304 | 1.0E-41 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 329 | 347 | 1.0E-41 | IPR001697 |
| PRINTS | PR01050 | Pyruvate kinase family signature | 221 | 235 | 1.0E-41 | IPR001697 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 596 | 619 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
ko00010 (Glycolysis / Gluconeogenesis)
map00010 (Glycolysis / Gluconeogenesis)
ko00230 (Purine metabolism)
map00230 (Purine metabolism)
ko00620 (Pyruvate metabolism)
map00620 (Pyruvate metabolism)
ko01100 (Metabolic pathways)
map01100 (Metabolic pathways)
ko01110 (Biosynthesis of secondary metabolites)
map01110 (Biosynthesis of secondary metabolites)
ko01120 (Microbial metabolism in diverse environments)
map01120 (Microbial metabolism in diverse environments)
ko01200 (Carbon metabolism)
map01200 (Carbon metabolism)
ko01230 (Biosynthesis of amino acids)
map01230 (Biosynthesis of amino acids)
Module:
Reaction:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G52990.1 | Pyruvate kinase family protein. | 0 |
| RefSeq | XP_039835620.1 | pyruvate kinase 1, cytosolic-like [Panicum virgatum] | 0 |
| B8BJ39 | Pyruvate kinase 1, cytosolic OS=Oryza sativa subsp. indica OX=39946 GN=OsI_35105 PE=3 SV=1 | 0 | |
| TrEMBL | A0A3L6Q518 | Pyruvate kinase OS=Panicum miliaceum OX=4540 GN=C2845_PM17G01740 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology