Basic Information
Locus ID:
CH04.2661
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
cell redox homeostasis
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 41228414 | 41231432 | - | CH04.2661 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 39,070.58 Da | 36.17 | 88.17 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 12 | 235 | 3.4E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 10 | 228 | 5.53E-57 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 7 | 287 | 2.2E-58 | - |
| SMART | SM00220 | serkin_6 | 9 | 288 | 3.1E-21 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 9 | 338 | 32.131542 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 15 | 37 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 147 | 159 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11410.2 | - | 8.62E-47 |
| RefSeq | XP_021302060.1 | uncharacterized protein LOC8067139 isoform X1 [Sorghum bicolor] | 1.89E-103 |
| Q9LPZ3 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 OS=Arabidopsis thaliana OX=3702 GN=At1g11410 PE=3 SV=3 | 1.57E-45 | |
| TrEMBL | A0A5J9VIA5 | Protein kinase domain-containing protein (Fragment) OS=Eragrostis curvula OX=38414 GN=EJB05_17836 PE=3 SV=1 | 1.12E-117 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | AH04.2252, CH04.2661 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0221540.1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_049244 |
| Poaceae | Puccinellia tenuiflora | 3 | Pt_Chr0702314, Pt_Chr0702315, Pt_Chr0702317 |
| Poaceae | Triticum aestivum | 2 | TraesCS3D02G022700.2, TraesCS7B02G357700.1 |