Basic Information
Locus ID:
CH04.2576
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 39909648 | 39914065 | + | CH04.2576 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.20 | 68,147.75 Da | 46.20 | 87.19 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 300 | 578 | 1.2E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 282 | 583 | 1.01E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 268 | 379 | 2.3E-31 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 87 | 197 | 4.6E-25 | IPR036537 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 380 | 586 | 1.9E-52 | - |
| SMART | SM00220 | serkin_6 | 299 | 580 | 3.0E-30 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 299 | 587 | 36.089062 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 305 | 327 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 425 | 437 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 38 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 43 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 2.98E-84 |
| RefSeq | XP_021317530.1 | cysteine-rich receptor-like protein kinase 15 isoform X1 [Sorghum bicolor] | 3.36E-272 |
| O64776 | G-type lectin S-receptor-like serine/threonine-protein kinase At1g61440 OS=Arabidopsis thaliana OX=3702 GN=At1g61440 PE=3 SV=2 | 2.24E-81 | |
| TrEMBL | A0A0A8ZBG1 | Protein kinase domain-containing protein OS=Arundo donax OX=35708 PE=3 SV=1 | 1.44E-273 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.2576 |
| Poaceae | Oryza coarctata | 1 | Oco21G009560 |
| Poaceae | Paspalum vaginatum | 4 | gene-BS78_05G254200, gene-BS78_K262300, gene-BS78_K341200 ... |
| Poaceae | Sporobolus alterniflorus | 1 | Chr16G007570 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G128200 |
| Poaceae | Triticum aestivum | 1 | TraesCS6B02G067800.1 |
| Poaceae | Zea mays | 1 | Zm00001eb115890_P001 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g18271 |