Basic Information
Locus ID:
CH04.2575
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
source UniProtKB
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 39903510 | 39908257 | + | CH04.2575 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.45 | 124,165.05 Da | 50.00 | 74.79 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 894 | 1070 | 2.8E-24 | IPR000719 |
| Pfam | PF02902 | Ulp1 protease family, C-terminal catalytic domain | 738 | 838 | 2.7E-7 | IPR003653 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 891 | 1075 | 4.86E-42 | IPR011009 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 668 | 876 | 3.34E-16 | IPR038765 |
| Gene3D | G3DSA:3.40.395.10 | Adenoviral Proteinase; Chain A | 693 | 859 | 9.4E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 874 | 1083 | 1.8E-48 | - |
| SMART | SM00220 | serkin_6 | 808 | 1073 | 1.5E-7 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 754 | 1080 | 20.697136 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 918 | 930 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 485 | 511 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 85 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 451 | 514 | - | - |
| Coils | Coil | Coil | 298 | 329 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23180.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 10. Encodes a receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 2.94E-44 |
| RefSeq | XP_039815011.1 | uncharacterized protein LOC120677882 [Panicum virgatum] | 6.74E-181 |
| Q8GYA4 | Cysteine-rich receptor-like protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CRK10 PE=1 SV=3 | 2.89E-43 | |
| TrEMBL | A0A8T0QV26 | ULP_PROTEASE domain-containing protein OS=Panicum virgatum OX=38727 GN=PVAP13_6NG075360 PE=3 SV=1 | 3.51E-170 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 9 | AH01.1897, AH04.860, AH07.1629, BH04.533, BH04.967, BH07.812 ... |
| Poaceae | Oryza coarctata | 6 | Oco03G009010, Oco05G016430, Oco09G004560, Oco10G016000 ... |
| Poaceae | Oryza sativa | 1 | LOC_Os06g28030.1 |
| Poaceae | Sporobolus alterniflorus | 13 | Chr02G009070, Chr06G027180, Chr06G027640, Chr08G004160 ... |
| Poaceae | Zea mays | 1 | Zm00001eb262950_P001 |