Basic Information
Locus ID:
CH04.2490
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Short Name:
NHX1
Description:
Belongs to the monovalent cation proton antiporter 1 (CPA1) transporter (TC 2.A.36) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 38715221 | 38719091 | - | CH04.2490 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.00 | 59,552.00 Da | 36.86 | 110.84 | 0.55 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00999 | Sodium/hydrogen exchanger family | 27 | 443 | 4.7E-57 | IPR006153 |
| Gene3D | G3DSA:6.10.140.1330 | - | 145 | 196 | 1.7E-14 | - |
| TIGRFAM | TIGR00840 | b_cpa1: sodium/hydrogen exchanger 3 | 23 | 455 | 1.0E-76 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 97 | 111 | 3.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 112 | 120 | 3.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 152 | 162 | 3.1E-11 | IPR004709 |
| PRINTS | PR01084 | Na+/H+ exchanger signature | 83 | 94 | 3.1E-11 | IPR004709 |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G05030.1 | sodium hydrogen exchanger 2. member of Sodium proton exchanger family | 3.07E-263 |
| RefSeq | XP_034569358.1 | sodium/hydrogen exchanger 2-like [Setaria viridis] | 0 |
| Q9SXJ8 | Sodium/hydrogen exchanger 1 OS=Oryza sativa subsp. japonica OX=39947 GN=NHX1 PE=2 SV=1 | 2.35E-275 | |
| TrEMBL | A0A4U6TNL5 | Sodium/hydrogen exchanger OS=Setaria viridis OX=4556 GN=SEVIR_8G226700v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology