Basic Information
Locus ID:
CH04.2291
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Jacalin-like lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 35993328 | 36004724 | + | CH04.2291 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.40 | 79,326.22 Da | 31.45 | 76.38 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd09612 | Jacalin | 424 | 555 | 4.2905E-32 | IPR033734 |
| Pfam | PF01419 | Jacalin-like lectin domain | 604 | 723 | 1.3E-16 | IPR001229 |
| Pfam | PF00069 | Protein kinase domain | 19 | 296 | 4.8E-50 | IPR000719 |
| Pfam | PF01419 | Jacalin-like lectin domain | 435 | 557 | 7.5E-18 | IPR001229 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 7 | 298 | 7.79E-65 | IPR011009 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 571 | 723 | 4.84E-33 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 316 | 380 | 2.09E-11 | IPR036404 |
| SUPERFAMILY | SSF51101 | Mannose-binding lectins | 412 | 558 | 1.83E-39 | IPR036404 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 111 | 316 | 5.8E-50 | - |
| Gene3D | G3DSA:2.100.10.30 | - | 568 | 728 | 1.2E-38 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 317 | 384 | 4.7E-11 | IPR036404 |
| Gene3D | G3DSA:2.100.10.30 | - | 411 | 558 | 3.4E-44 | IPR036404 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 4 | 88 | 1.9E-23 | - |
| SMART | SM00220 | serkin_6 | 18 | 299 | 4.7E-34 | IPR000719 |
| SMART | SM00915 | Jacalin_2 | 587 | 725 | 2.4E-5 | IPR001229 |
| SMART | SM00915 | Jacalin_2 | 424 | 558 | 1.6E-6 | IPR001229 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 18 | 299 | 35.834648 | IPR000719 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 413 | 558 | 32.60004 | IPR001229 |
| ProSiteProfiles | PS51752 | Jacalin-type lectin domain profile. | 570 | 725 | 25.884533 | IPR001229 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 152 | 164 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 24 | 47 | - | IPR017441 |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23230.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15. Encodes a cysteine-rich receptor-like protein kinase. | 5.84E-54 |
| RefSeq | XP_015636615.1 | mannose/glucose-specific lectin isoform X1 [Oryza sativa Japonica Group] | 0 |
| Q8W4G6 | Cysteine-rich receptor-like protein kinase 15 OS=Arabidopsis thaliana OX=3702 GN=CRK15 PE=2 SV=2 | 5.72E-53 | |
| TrEMBL | A0A0E0P7W0 | Protein kinase domain-containing protein OS=Oryza rufipogon OX=4529 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology