Basic Information
Locus ID:
CH04.2290
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Wall-associated receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 35970010 | 35972222 | + | CH04.2290 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.39 | 54,005.69 Da | 45.87 | 87.33 | -0.36 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00635 | MSP (Major sperm protein) domain | 334 | 433 | 2.7E-9 | IPR000535 |
| Pfam | PF00069 | Protein kinase domain | 28 | 308 | 2.3E-52 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 12 | 312 | 3.28E-68 | IPR011009 |
| SUPERFAMILY | SSF49354 | PapD-like | 332 | 467 | 1.05E-15 | IPR008962 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 119 | 329 | 8.7E-54 | - |
| Gene3D | G3DSA:2.60.40.10 | Immunoglobulins | 330 | 463 | 1.7E-20 | IPR013783 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 98 | 2.0E-26 | - |
| SMART | SM00220 | serkin_6 | 27 | 316 | 2.0E-35 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 27 | 316 | 37.191513 | IPR000719 |
| ProSiteProfiles | PS50202 | Major sperm protein (MSP) domain profile. | 333 | 461 | 14.799781 | IPR000535 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 33 | 56 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 162 | 174 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G00960.1 | Protein kinase superfamily protein. | 2.38E-61 |
| RefSeq | XP_015636625.1 | putative receptor-like protein kinase At4g00960 isoform X2 [Oryza sativa Japonica Group] | 1.18E-226 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 2.31E-60 | |
| TrEMBL | Q7XVI0 | OSJNBa0016N04.14 protein OS=Oryza sativa subsp. japonica OX=39947 GN=OSJNBa0016N04.14 PE=3 SV=2 | 2.67E-225 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology