Basic Information
Locus ID:
CH04.2256
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 35569474 | 35617939 | - | CH04.2256 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 114,212.73 Da | 55.62 | 74.66 | -0.51 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 402 | 440 | 2.2E-4 | IPR001810 |
| Pfam | PF00646 | F-box domain | 26 | 63 | 0.0014 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 395 | 456 | 3.53E-10 | IPR036047 |
| SUPERFAMILY | SSF81383 | F-box domain | 22 | 71 | 2.09E-10 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 596 | 808 | 3.26E-11 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 185 | 378 | 2.35E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 582 | 847 | 1.3E-10 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 400 | 453 | 1.1E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 163 | 387 | 1.8E-7 | IPR032675 |
| SMART | SM00256 | fbox_2 | 29 | 68 | 0.41 | IPR001810 |
| SMART | SM00256 | fbox_2 | 406 | 445 | 0.33 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 949 | 1006 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 491 | 507 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 887 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 469 | 490 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 989 | 1006 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 873 | 909 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 963 | 977 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 526 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53840.1 | F-box/RNI-like/FBD-like domains-containing protein. | 2.02E-9 |
| RefSeq | XP_025826646.1 | MEIOTIC F-BOX protein MOF-like [Panicum hallii] | 3.39E-165 |
| Q7X7A4 | MEIOTIC F-BOX protein MOF OS=Oryza sativa subsp. japonica OX=39947 GN=MOF PE=1 SV=2 | 2.66E-16 | |
| TrEMBL | A0A811Q960 | F-box domain-containing protein OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS36883 PE=4 SV=1 | 9.27E-286 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology