halophFGD

Basic Information

Locus ID: CH04.225

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: F-box-like

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH04	1826810	1828198	+	CH04.225

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
9.40	49,082.94 Da	54.24	86.45	-0.03

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF12937	F-box-like	40	71	4.3E-7	IPR001810
SUPERFAMILY	SSF81383	F-box domain	36	72	2.09E-7	IPR036047
Gene3D	G3DSA:1.20.1280.50	-	36	77	2.4E-6	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	22	-	-

Gene Ontology

Molecular Function:

GO:0005515 (protein binding)

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_015613807.1	uncharacterized protein LOC4348324 [Oryza sativa Japonica Group]	1.27E-98
TrEMBL	A0A1E5URJ1	F-box domain-containing protein OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0023512 PE=4 SV=1	1.58E-102

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	5	AH04.211, AH05.128, BH04.204, CH04.225, CH07.1911