Basic Information
Locus ID:
CH04.2238
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 35384221 | 35388027 | + | CH04.2238 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.90 | 70,006.40 Da | 56.18 | 87.19 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 177 | 385 | 8.8E-21 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 157 | 462 | 1.11E-41 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 245 | 476 | 5.4E-31 | - |
| Gene3D | G3DSA:1.20.930.20 | - | 17 | 124 | 5.0E-21 | IPR036537 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 133 | 241 | 1.1E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 168 | 465 | 23.198853 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 551 | 578 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 547 | 656 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 582 | 609 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 1.41E-53 |
| RefSeq | XP_004984958.1 | putative serine/threonine-protein kinase-like protein CCR3 [Setaria italica] | 7.4E-216 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 1.39E-52 | |
| TrEMBL | A0A3L6PMJ0 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Panicum miliaceum OX=4540 GN=C2845_PM18G10680 PE=4 SV=1 | 1.23E-215 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology