Basic Information
Locus ID:
CH04.2183
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the UDP-glycosyltransferase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 34500619 | 34502050 | + | CH04.2183 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.69 | 46,201.74 Da | 54.72 | 78.90 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03784 | GT1_Gtf-like | 8 | 286 | 1.09553E-27 | IPR002213 |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 363 | 437 | 6.22E-7 | - |
| SUPERFAMILY | SSF53756 | UDP-Glycosyltransferase/glycogen phosphorylase | 4 | 302 | 1.17E-46 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 2 | 142 | 6.0E-24 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 161 | 212 | 1.0E-27 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 363 | 432 | 3.1E-8 | - |
| Gene3D | G3DSA:3.40.50.2000 | Glycogen Phosphorylase B; | 229 | 305 | 1.0E-27 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 302 | 345 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12890.1 | UDP-Glycosyltransferase superfamily protein. | 7.73E-38 |
| RefSeq | XP_039783374.1 | UDP-glycosyltransferase 92A1-like [Panicum virgatum] | 7.58E-153 |
| Q9LXV0 | UDP-glycosyltransferase 92A1 OS=Arabidopsis thaliana OX=3702 GN=UGT92A1 PE=2 SV=1 | 7.58E-37 | |
| TrEMBL | A0A835EXA5 | Glycosyltransferase OS=Digitaria exilis OX=1010633 GN=HU200_022785 PE=3 SV=1 | 1.67E-155 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology