Basic Information
Locus ID:
CH04.2110
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
von Willebrand factor (vWF) type A domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 33750014 | 33751663 | + | CH04.2110 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.98 | 32,753.77 Da | 42.62 | 70.80 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_039777508.1 | uncharacterized protein LOC120644841 [Panicum virgatum] | 1.08E-135 |
| TrEMBL | A0A453T610 | VWFA domain-containing protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=4 SV=1 | 4.11E-135 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 1 | CH04.2110 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.2HG0095880.1 |
| Poaceae | Paspalum vaginatum | 3 | gene-BS78_05G188400, gene-BS78_05G188600, gene-BS78_K280100 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0205824 |
| Poaceae | Thinopyrum elongatum | 5 | Tel2E01G009600, Tel2E01G010800, Tel7E01G005600 ... |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2AG000300, gene_TRIDC2BG000030 ... |
| Poaceae | Triticum aestivum | 13 | TraesCS2A02G003000.1, TraesCS2B02G000200.1 ... |