halophFGD

Basic Information

Locus ID: CH04.2003

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Protein of unknown function (DUF295)

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH04	32009399	32010710	+	CH04.2003

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
8.27	44,772.73 Da	54.03	77.11	-0.17

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF03478	Protein of unknown function (DUF295)	320	369	4.8E-9	IPR005174
MobiDBLite	mobidb-lite	consensus disorder prediction	1	41	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	23	-	-

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_014661135.2	uncharacterized protein LOC106804478 [Setaria italica]	1.35E-197
TrEMBL	A0A368S8T6	DUF295 domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_8G172600v2 PE=4 SV=1	3.05E-196

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Poaceae	Echinochloa crus-galli	16	AH04.1756, AH06.1281, BH04.1756, BH04.1847, BH04.1848 ... BH04.1849, BH04.1851, BH04.1852, BH04.1853, BH04.1854, BH04.1855, CH04.2003, CH04.2074, CH04.2076, CH04.2078, CH04.2080
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1BG0086560, gene-QOZ80_6AG0515020 ... gene-QOZ80_6BG0466740, gene-QOZ80_7AG0582730, gene-QOZ80_9AG0683380, gene-QOZ80_9AG0683440, gene-QOZ80_9AG0683450, gene-QOZ80_9BG0709140, gene-QOZ80_9BG0709150, gene-QOZ80_9BG0709690
Poaceae	Hordeum vulgare	1	HORVU.MOREX.r3.7HG0654230.1.CDS1
Poaceae	Lolium multiflorum	1	gene-QYE76_066373
Poaceae	Oryza coarctata	3	Oco21G008030, Oco22G008270, Oco22G009240
Poaceae	Oryza sativa	8	LOC_Os04g25140.1, LOC_Os04g26240.1, LOC_Os04g26260.1 ... LOC_Os08g19680.1, LOC_Os11g38190.1, LOC_Os11g38200.1, LOC_Os11g38230.1, LOC_Os11g38250.1
Poaceae	Paspalum vaginatum	7	gene-BS78_04G157700, gene-BS78_05G190500, gene-BS78_K170500 ... gene-BS78_05G190600, gene-BS78_05G191400, gene-BS78_05G191600, gene-BS78_05G191800
Poaceae	Puccinellia tenuiflora	1	Pt_Chr0103201
Poaceae	Sporobolus alterniflorus	6	Chr07G015460, Chr07G015470, Chr16G005180, Chr16G005200 ... Chr31G007380, Chr31G007390
Poaceae	Thinopyrum elongatum	1	Tel7E01G234900
Poaceae	Triticum dicoccoides	2	gene_TRIDC7AG013710, gene_TRIDC7BG002110
Poaceae	Triticum aestivum	3	TraesCS7A02G118000.1.cds1, TraesCS7B02G015000.1.cds1 ... TraesCS7D02G113500.1.cds1
Poaceae	Zea mays	2	Zm00001eb114820_P001, Zm00001eb167580_P001
Poaceae	Zoysia japonica	1	nbis-gene-46147
Poaceae	Zoysia macrostachya	1	Zma_g19026