Basic Information
Locus ID:
CH04.1915
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Targeting protein for Xklp2 (TPX2)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 31052647 | 31057097 | + | CH04.1915 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.28 | 69,616.65 Da | 56.92 | 60.41 | -0.69 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF06886 | Targeting protein for Xklp2 (TPX2) domain | 444 | 527 | 4.0E-23 | IPR027329 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 89 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 211 | 258 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 212 | 230 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 500 | 636 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 531 | 563 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 600 | 628 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 280 | 447 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 419 | 435 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 152 | - | - |
| Coils | Coil | Coil | 459 | 489 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35880.1 | TPX2 (targeting protein for Xklp2) protein family. | 7.98E-39 |
| RefSeq | XP_034568386.1 | protein WVD2-like 4 isoform X1 [Setaria viridis] | 1.82E-196 |
| Q9SJ62 | Protein WVD2-like 4 OS=Arabidopsis thaliana OX=3702 GN=WDL4 PE=1 SV=2 | 7.79E-38 | |
| TrEMBL | A0A4U6THY0 | TPX2 domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_8G168400v2 PE=3 SV=1 | 4.12E-195 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology