Basic Information
Locus ID:
CH04.1869
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 30307379 | 30311650 | - | CH04.1869 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.44 | 91,496.87 Da | 48.10 | 90.37 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 518 | 767 | 1.6E-20 | IPR001245 |
| Pfam | PF00069 | Protein kinase domain | 172 | 428 | 2.4E-43 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 156 | 456 | 1.01E-64 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 489 | 771 | 4.59E-44 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 150 | 241 | 9.2E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 590 | 783 | 1.1E-23 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 485 | 588 | 1.0E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 242 | 458 | 1.0E-47 | - |
| SMART | SM00220 | serkin_6 | 167 | 436 | 2.2E-27 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 167 | 447 | 34.647392 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 513 | 770 | 18.831448 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 288 | 300 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 173 | 196 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 97 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 99 | - | - |
| Coils | Coil | Coil | 426 | 446 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G21240.1 | wall associated kinase 3. encodes a wall-associated kinase | 5.09E-51 |
| RefSeq | XP_039777315.1 | serine/threonine-protein kinase-like protein At1g28390 [Panicum virgatum] | 0 |
| Q9LMN8 | Wall-associated receptor kinase 3 OS=Arabidopsis thaliana OX=3702 GN=WAK3 PE=2 SV=2 | 5.01E-50 | |
| TrEMBL | A0A1E5V922 | Wall-associated receptor kinase 2 OS=Dichanthelium oligosanthes OX=888268 GN=BAE44_0017328 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 2 | CH04.1869, CH05.2817 |
| Poaceae | Eleusine coracana subsp. coracana | 4 | gene-QOZ80_5AG0375270, gene-QOZ80_9AG0685500 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0325550.1.CDS1 |
| Poaceae | Oryza coarctata | 1 | Oco22G008390 |
| Poaceae | Oryza sativa | 8 | LOC_Os10g02360.1, LOC_Os10g05250.1, LOC_Os10g05400.1 ... |
| Poaceae | Paspalum vaginatum | 13 | gene-BS78_05G166100, gene-BS78_05G166500, gene-BS78_K038600 ... |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0600798 |
| Poaceae | Sporobolus alterniflorus | 6 | Chr01G028150, Chr07G016140, Chr16G005860, Chr16G005880 ... |
| Poaceae | Thinopyrum elongatum | 2 | Tel2E01G153000, Tel7E01G297400 |
| Poaceae | Triticum dicoccoides | 6 | gene_TRIDC2BG007840, gene_TRIDC3AG072500 ... |
| Poaceae | Triticum aestivum | 5 | TraesCS2B02G075200.1, TraesCS3B02G579200.1.cds1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb114030_P001, Zm00001eb114060_P001 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-44241 |
| Poaceae | Zoysia macrostachya | 2 | Zma_g18068, Zma_g18069 |