Basic Information
Locus ID:
CH04.1694
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Flavinator of succinate dehydrogenase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 27946876 | 27947964 | + | CH04.1694 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.22 | 24,112.99 Da | 78.73 | 85.34 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03937 | Flavinator of succinate dehydrogenase | 161 | 201 | 5.2E-10 | IPR005631 |
| SUPERFAMILY | SSF109910 | YgfY-like | 160 | 199 | 3.14E-7 | IPR036714 |
| Gene3D | G3DSA:1.10.150.250 | Flavinator of succinate dehydrogenase | 158 | 216 | 4.2E-10 | IPR036714 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 61 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G51040.4 | - | 5.05E-17 |
| RefSeq | XP_039824696.1 | succinate dehydrogenase assembly factor 2, mitochondrial-like [Panicum virgatum] | 1.03E-37 |
| Q9FI44 | Succinate dehydrogenase assembly factor 2, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=SDHAF2 PE=1 SV=1 | 1.03E-15 | |
| TrEMBL | A0A8T0P760 | Succinate dehydrogenase assembly factor 2, mitochondrial OS=Panicum virgatum OX=38727 GN=PVAP13_8NG106100 PE=4 SV=1 | 2.33E-36 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||