HalophFGD

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Basic Information
Locus ID: CH04.1460
Species & Taxonomic ID: Echinochloa crus-galli & 90397
Genome Assembly: GWHBDNR00000000
Description: Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
Chromosome Start End Strand ID
CH04 23552302 23553371 + CH04.1460
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
11.49 21,910.74 Da 60.13 65.69 -0.52
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
SUPERFAMILY SSF52058 L domain-like 144 203 1.08E-10 -
Gene3D G3DSA:3.80.10.10 Ribonuclease Inhibitor 136 204 2.0E-12 IPR032675
MobiDBLite mobidb-lite consensus disorder prediction 98 129 - -
MobiDBLite mobidb-lite consensus disorder prediction 1 60 - -
MobiDBLite mobidb-lite consensus disorder prediction 40 54 - -
Best hit
Source Best Hit ID Description E-value
RefSeq XP_002458184.2 protein TOO MANY MOUTHS [Sorghum bicolor] 1.04E-13
TrEMBL A0A811NVB0 Protein TOO MANY MOUTHS OS=Miscanthus lutarioriparius OX=422564 GN=NCGR_LOCUS20978 PE=4 SV=1 2.34E-12
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Poaceae Echinochloa crus-galli 8 AH05.2705, BH03.11, BH03.3304, BH03.914, BH06.1333 ...
BH09.1680, CH04.1460, CH05.2583
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.