Basic Information
Locus ID:
CH04.1458
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
belongs to the protein kinase superfamily
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 23506936 | 23509600 | - | CH04.1458 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 10.17 | 39,302.90 Da | 79.63 | 73.82 | -0.35 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 303 | 363 | 7.3E-11 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 302 | 364 | 2.97E-19 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 271 | 364 | 1.3E-19 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 137 | 364 | 12.08953 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 218 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 129 | 150 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 105 | 124 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 192 | 218 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G61590.1 | Protein kinase superfamily protein. | 1.57E-25 |
| RefSeq | XP_025811677.1 | probable serine/threonine-protein kinase PIX13 isoform X2 [Panicum hallii] | 6.95E-32 |
| Q9SY91 | Probable serine/threonine-protein kinase PBL15 OS=Arabidopsis thaliana OX=3702 GN=PBL15 PE=1 SV=1 | 1.55E-24 | |
| TrEMBL | A0A1D6GWS6 | Putative serine/threonine-protein kinase Cx32 chloroplastic OS=Zea mays OX=4577 GN=ZEAMMB73_Zm00001d014850 PE=4 SV=1 | 5.49E-31 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 5 | BH08.350, CH04.1458, CH05.3502, CH05.3658, Contig2359.2 |