Basic Information
Locus ID:
CH04.1434
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH04 | 22822097 | 22833377 | + | CH04.1434 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.02 | 117,025.48 Da | 43.81 | 81.14 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02248 | Peptidase_C1A | 116 | 309 | 1.27036E-78 | IPR039417 |
| Pfam | PF00112 | Papain family cysteine protease | 117 | 309 | 3.9E-62 | IPR000668 |
| Pfam | PF00069 | Protein kinase domain | 604 | 697 | 7.3E-17 | IPR000719 |
| Pfam | PF08246 | Cathepsin propeptide inhibitor domain (I29) | 20 | 79 | 2.1E-12 | IPR013201 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 534 | 750 | 3.46E-44 | IPR011009 |
| SUPERFAMILY | SSF54001 | Cysteine proteinases | 14 | 311 | 7.02E-88 | IPR038765 |
| Gene3D | G3DSA:3.90.70.10 | Cysteine proteinases | 5 | 315 | 5.4E-94 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 513 | 594 | 3.8E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 595 | 754 | 2.6E-31 | - |
| SMART | SM00220 | serkin_6 | 553 | 746 | 1.8E-7 | IPR000719 |
| SMART | SM00645 | pept_c1 | 115 | 313 | 1.0E-80 | IPR000668 |
| SMART | SM00848 | Inhibitor_I29_2 | 20 | 79 | 1.4E-19 | IPR013201 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 432 | 746 | 14.746722 | IPR000719 |
| ProSitePatterns | PS00639 | Eukaryotic thiol (cysteine) proteases histidine active site. | 269 | 279 | - | IPR025660 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 624 | 636 | - | IPR008271 |
| PRINTS | PR00705 | Papain cysteine protease (C1) family signature | 132 | 147 | 4.0E-7 | IPR000668 |
| PRINTS | PR00705 | Papain cysteine protease (C1) family signature | 287 | 293 | 4.0E-7 | IPR000668 |
| PRINTS | PR00705 | Papain cysteine protease (C1) family signature | 271 | 281 | 4.0E-7 | IPR000668 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 828 | 845 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1044 | 1067 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 825 | 860 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G49340.1 | Cysteine proteinases superfamily protein. | 2.38E-81 |
| RefSeq | XP_002449458.1 | ervatamin-B [Sorghum bicolor] | 1.09E-126 |
| A2XQE8 | Senescence-specific cysteine protease SAG39 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_14861 PE=3 SV=1 | 1.74E-85 | |
| TrEMBL | C5Y289 | Senescence-specific cysteine protease SAG39-like OS=Sorghum bicolor OX=4558 GN=SORBI_3005G112400 PE=3 SV=1 | 2.47E-125 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||