Basic Information
Locus ID:
CH03.898
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Domain of unknown function (DUF4535)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 10954028 | 10957240 | - | CH03.898 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 11.35 | 35,861.10 Da | 71.78 | 68.63 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF15054 | Domain of unknown function (DUF4535) | 281 | 324 | 2.7E-19 | IPR027854 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 76 | 93 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 45 | 137 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 115 | 133 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G35736.1 | 3.14E-18 | |
| RefSeq | XP_021307880.1 | uncharacterized protein LOC8081771 [Sorghum bicolor] | 3.07E-30 |
| TrEMBL | A0A368PX51 | Type IV conjugative transfer system coupling protein TraD OS=Setaria italica OX=4555 GN=SETIT_2G091800v2 PE=4 SV=1 | 5.94E-32 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology