Basic Information
Locus ID:
CH03.890
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 10899060 | 10900680 | - | CH03.890 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.86 | 48,895.08 Da | 46.57 | 95.62 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF52058 | L domain-like | 107 | 350 | 2.48E-14 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 16 | 70 | 7.46E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 15 | 65 | 3.5E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 102 | 386 | 1.0E-14 | IPR032675 |
| SMART | SM00256 | fbox_2 | 22 | 61 | 0.0018 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 16 | 52 | 8.702637 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G13985.1 | FBD-associated F-box protein. | 3.21E-15 |
| RefSeq | XP_025804600.1 | MEIOTIC F-BOX protein MOF-like isoform X1 [Panicum hallii] | 1.25E-198 |
| Q4PSI6 | FBD-associated F-box protein At4g13985 OS=Arabidopsis thaliana OX=3702 GN=At4g13985 PE=2 SV=1 | 3.18E-14 | |
| TrEMBL | A0A2T7EMM3 | F-box domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G079100 PE=4 SV=1 | 3.09E-200 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology