Basic Information
Locus ID:
CH03.663
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Lectin-domain containing receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 8192023 | 8200561 | + | CH03.663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.37 | 106,952.26 Da | 60.75 | 83.24 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 120 | 321 | 9.5E-36 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 103 | 382 | 1.48E-57 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 105 | 190 | 6.6E-19 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 191 | 394 | 3.8E-36 | - |
| SMART | SM00220 | serkin_6 | 118 | 390 | 1.4E-20 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 118 | 396 | 31.622717 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 234 | 246 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 124 | 145 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 880 | 899 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 471 | 492 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 527 | 569 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G12000.2 | - | 3.44E-50 |
| RefSeq | XP_025877490.1 | U-box domain-containing protein 70 [Oryza sativa Japonica Group] | 1.05E-75 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 7.42E-47 | |
| TrEMBL | A0A835AW86 | Protein kinase domain-containing protein OS=Digitaria exilis OX=1010633 GN=HU200_046401 PE=4 SV=1 | 5.22E-99 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||