Basic Information
Locus ID:
CH03.549
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein FAR1-RELATED SEQUENCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 6869589 | 6875783 | + | CH03.549 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.74 | 149,894.45 Da | 49.04 | 70.89 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03101 | FAR1 DNA-binding domain | 168 | 246 | 4.9E-14 | IPR004330 |
| Pfam | PF10551 | MULE transposase domain | 370 | 462 | 2.5E-23 | IPR018289 |
| Pfam | PF10536 | Plant mobile domain | 919 | 1281 | 8.5E-66 | IPR019557 |
| ProSiteProfiles | PS50966 | Zinc finger SWIM-type profile. | 654 | 690 | 9.445667 | IPR007527 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 69 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 777 | 803 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 42 | 61 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 771 | 827 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38180.1 | FAR1-related sequence 5. | 7.62E-70 |
| RefSeq | XP_039793600.1 | protein FAR1-RELATED SEQUENCE 9-like [Panicum virgatum] | 0 |
| Q9SZL8 | Protein FAR1-RELATED SEQUENCE 5 OS=Arabidopsis thaliana OX=3702 GN=FRS5 PE=1 SV=1 | 7.46E-69 | |
| TrEMBL | A0A835F8V6 | Protein FAR1-RELATED SEQUENCE OS=Digitaria exilis OX=1010633 GN=HU200_016092 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology