halophFGD

Basic Information

Locus ID: CH03.548

Species & Taxonomic ID: Echinochloa crus-galli & 90397

Genome Assembly: GWHBDNR00000000

Description: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
CH03	6862218	6868879	+	CH03.548

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
10.98	112,849.25 Da	73.22	44.43	-1.13

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
CDD	cd01926	cyclophilin_ABH_like	400	566	1.01526E-92	-
Pfam	PF00160	Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD	404	566	4.9E-46	IPR002130
SUPERFAMILY	SSF50891	Cyclophilin-like	394	568	2.05E-70	IPR029000
Gene3D	G3DSA:2.40.100.10	-	390	575	2.5E-78	IPR029000
ProSiteProfiles	PS50072	Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.	403	567	41.884956	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	420	435	1.5E-29	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	528	543	1.5E-29	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	500	515	1.5E-29	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	515	527	1.5E-29	IPR002130
PRINTS	PR00153	Cyclophilin peptidyl-prolyl cis-trans isomerase signature	457	469	1.5E-29	IPR002130
MobiDBLite	mobidb-lite	consensus disorder prediction	1022	1040	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	926	948	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	992	1021	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	871	892	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	697	712	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	577	603	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	950	968	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	976	991	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	84	112	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	88	112	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	713	735	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	357	396	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	572	1040	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	1	68	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	656	692	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	621	650	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	736	793	-	-

Gene Ontology

Biological Process:

GO:0000413 (protein peptidyl-prolyl isomerization)

Molecular Function:

GO:0003755 (peptidyl-prolyl cis-trans isomerase activity)

KEGG Pathway

KO Term:

K09566 (peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8])

Best hit

Source	Best Hit ID	Description	E-value
TAIR	AT3G63400.2	Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein.	3.68E-80
RefSeq	XP_025800948.1	peptidyl-prolyl cis-trans isomerase CYP63-like isoform X1 [Panicum hallii]	1.5E-257
Swiss-Prot	Q9LY75	Peptidyl-prolyl cis-trans isomerase CYP63 OS=Arabidopsis thaliana OX=3702 GN=CYP63 PE=1 SV=1	5.18E-77
TrEMBL	A0A2T7ELC9	PPIase cyclophilin-type domain-containing protein OS=Panicum hallii var. hallii OX=1504633 GN=GQ55_2G045600 PE=4 SV=1	1.06E-257

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	9	jg10021, jg16661, jg28840, jg34482, jg38018, jg4506, jg5331 ... jg7832, jg9624
Aizoaceae	Mesembryanthemum crystallinum	7	gene_13529, gene_17002, gene_17994, gene_26660, gene_6900 ... gene_8458, gene_8601
Amaranthaceae	Atriplex hortensis	5	Ah000298, Ah006313, Ah013975, Ah019662, Ah027843
Amaranthaceae	Beta vulgaris	6	BVRB_2g023770, BVRB_3g059000, BVRB_5g120120, BVRB_6g150350 ... BVRB_7g172160, BVRB_9g214560
Amaranthaceae	Salicornia bigelovii	13	Sbi_jg12155, Sbi_jg1568, Sbi_jg16643, Sbi_jg22429 ... Sbi_jg31603, Sbi_jg34974, Sbi_jg38467, Sbi_jg42551, Sbi_jg45179, Sbi_jg47097, Sbi_jg57667, Sbi_jg61209, Sbi_jg6574
Amaranthaceae	Salicornia europaea	7	Seu_jg15351, Seu_jg16310, Seu_jg21376, Seu_jg22940 ... Seu_jg25342, Seu_jg26985, Seu_jg3177
Amaranthaceae	Suaeda aralocaspica	8	GOSA_00002724, GOSA_00002726, GOSA_00003363, GOSA_00006448 ... GOSA_00008138, GOSA_00016451, GOSA_00020385, GOSA_00025844
Amaranthaceae	Suaeda glauca	11	Sgl01881, Sgl07058, Sgl35504, Sgl54280, Sgl55402, Sgl59620 ... Sgl61504, Sgl62909, Sgl67477, Sgl72788, Sgl76327
Amaranthaceae	Chenopodium album	23	gene:ENSEOMG00000002191, gene:ENSEOMG00000005078 ... gene:ENSEOMG00000005583, gene:ENSEOMG00000010519, gene:ENSEOMG00000014570, gene:ENSEOMG00000015778, gene:ENSEOMG00000016763, gene:ENSEOMG00000017703, gene:ENSEOMG00000018185, gene:ENSEOMG00000024268, gene:ENSEOMG00000024798, gene:ENSEOMG00000024911, gene:ENSEOMG00000026393, gene:ENSEOMG00000027469, gene:ENSEOMG00000029308, gene:ENSEOMG00000036174, gene:ENSEOMG00000037578, gene:ENSEOMG00000039676, gene:ENSEOMG00000041964, gene:ENSEOMG00000043100, gene:ENSEOMG00000049065, gene:ENSEOMG00000050105, gene:ENSEOMG00000052892
Amaranthaceae	Chenopodium quinoa	11	CQ.Regalona.r1.2AG0021530, CQ.Regalona.r1.3AG0011270 ... CQ.Regalona.r1.3BG0011440, CQ.Regalona.r1.4BG0011650, CQ.Regalona.r1.5AG0025390, CQ.Regalona.r1.5BG0026950, CQ.Regalona.r1.6AG0002540, CQ.Regalona.r1.6BG0002500, CQ.Regalona.r1.7BG0003310, CQ.Regalona.r1.9AG0021270, CQ.Regalona.r1.9BG0001350
Anacardiaceae	Pistacia vera	6	pistato.v30007070, pistato.v30026540, pistato.v30061450 ... pistato.v30183770, pistato.v30228930, pistato.v30252560
Apiaceae	Apium graveolens	9	Ag1G01083, Ag3G02528, Ag4G01705, Ag6G01321, Ag6G02138 ... Ag7G01295, Ag8G02288, Ag9G02378, AgUnG00868
Arecaceae	Cocos nucifera	5	COCNU_02G013910, COCNU_07G002010, COCNU_08G008550 ... COCNU_09G003890, COCNU_10G010440
Arecaceae	Phoenix dactylifera	8	gene-LOC103697249, gene-LOC103698529, gene-LOC103699121 ... gene-LOC103703857, gene-LOC103706143, gene-LOC103712987, gene-LOC103714064, gene-LOC120105875
Asparagaceae	Asparagus officinalis	6	AsparagusV1_01.3097.V1.1, AsparagusV1_01.682.V1.1 ... AsparagusV1_03.563.V1.1, AsparagusV1_05.283.V1.1, AsparagusV1_06.1165.V1.1, AsparagusV1_09.1407.V1.1
Asteraceae	Flaveria trinervia	8	Ftri10G19419, Ftri12G09082, Ftri13G07329, Ftri1G33373 ... Ftri4G10426, Ftri5G26140, Ftri9G00890, Ftri9G07232
Brassicaceae	Arabidopsis thaliana	10	AT2G16600.1, AT2G21130.1, AT2G29960.1, AT3G55920.1 ... AT3G56070.1, AT3G62030.2, AT4G34870.1, AT4G38740.1, AT5G13120.1, AT5G58710.1
Brassicaceae	Eutrema salsugineum	12	Thhalv10000350m.g.v1.0, Thhalv10006033m.g.v1.0 ... Thhalv10006185m.g.v1.0, Thhalv10006270m.g.v1.0, Thhalv10010699m.g.v1.0, Thhalv10014434m.g.v1.0, Thhalv10014704m.g.v1.0, Thhalv10016970m.g.v1.0, Thhalv10022161m.g.v1.0, Thhalv10022880m.g.v1.0, Thhalv10026397m.g.v1.0, Thhalv10027585m.g.v1.0
Brassicaceae	Schrenkiella parvula	10	Sp3g30130.v2.2, Sp4g00280.v2.2, Sp4g12520.v2.2 ... Sp5g01330.v2.2, Sp5g06460.v2.2, Sp5g06600.v2.2, Sp6g20400.v2.2, Sp6g30860.v2.2, Sp7g32640.v2.2, Sp7g37060.v2.2
Brassicaceae	Brassica nigra	12	BniB01g014220.2N, BniB02g038150.2N, BniB02g089580.2N ... BniB03g015620.2N, BniB04g026630.2N, BniB05g003420.2N, BniB06g019010.2N, BniB06g061670.2N, BniB08g006120.2N, BniB08g012990.2N, BniB08g070670.2N, BniB08g076250.2N
Casuarinaceae	Casuarina equisetifolia	8	Ceq02G0138, Ceq04G2311, Ceq06G0565, Ceq06G2057, Ceq06G2180 ... Ceq07G0976, Ceq07G1659, Ceq08G1878
Casuarinaceae	Casuarina glauca	8	Cgl02G0154, Cgl04G2514, Cgl06G0585, Cgl06G2172, Cgl06G2297 ... Cgl07G1019, Cgl07G1797, Cgl08G1933
Cymodoceaceae	Cymodocea nodosa	5	gene.Cymno03g05370, gene.Cymno08g05690, gene.Cymno14g00050 ... gene.Cymno14g01720, gene.Cymno14g10590
Dunaliellaceae	Dunaliella salina	8	Dusal.0088s00011.v1.0, Dusal.0283s00008.v1.0 ... Dusal.0290s00017.v1.0, Dusal.0574s00008.v1.0, Dusal.0792s00004.v1.0, Dusal.0916s00002.v1.0, Dusal.1065s00003.v1.0, Dusal.1156s00003.v1.0
Hydrocharitaceae	Thalassia testudinum	6	gene.Thate01g12720, gene.Thate02g02220, gene.Thate02g02330 ... gene.Thate08g02290, gene.Thate08g02320, gene.Thate08g11440
Malvaceae	Hibiscus hamabo Siebold & Zucc.	1	nbisL1-mrna-6322
Nitrariaceae	Nitraria sibirica	8	evm.TU.LG02.1870, evm.TU.LG03.2212, evm.TU.LG03.812 ... evm.TU.LG04.1156, evm.TU.LG04.566, evm.TU.LG07.1418, evm.TU.LG08.268, evm.TU.LG09.1093
Plantaginaceae	Plantago ovata	8	Pov_00001571, Pov_00007383, Pov_00011800, Pov_00013731 ... Pov_00016317, Pov_00019607, Pov_00025951, Pov_00034209
Plumbaginaceae	Limonium bicolor	5	Lb2G12692, Lb3G19170, Lb3G19192, Lb7G33676, Lb7G34335
Poaceae	Echinochloa crus-galli	26	AH02.1329, AH03.1146, AH03.391, AH06.2925, AH06.2926 ... AH07.2000, AH07.203, BH01.2845, BH02.1377, BH03.1305, BH05.1262, BH06.2716, BH06.2717, BH07.1968, BH07.217, BH07.902, CH01.2775, CH01.3054, CH02.1486, CH03.1470, CH03.4653, CH03.548, CH05.1439, CH06.3051, CH06.3052, CH07.1828
Poaceae	Eleusine coracana subsp. coracana	18	gene-QOZ80_1AG0003090, gene-QOZ80_1BG0051560 ... gene-QOZ80_2AG0099660, gene-QOZ80_2AG0105580, gene-QOZ80_2AG0120190, gene-QOZ80_2BG0153100, gene-QOZ80_2BG0153110, gene-QOZ80_2BG0159010, gene-QOZ80_2BG0174440, gene-QOZ80_5AG0408910, gene-QOZ80_5BG0457300, gene-QOZ80_6AG0524970, gene-QOZ80_6AG0550300, gene-QOZ80_6AG0550310, gene-QOZ80_6BG0478600, gene-QOZ80_6BG0503880, gene-QOZ80_7AG0558060, gene-QOZ80_7BG0589180
Poaceae	Hordeum vulgare	8	HORVU.MOREX.r3.1HG0000850.1, HORVU.MOREX.r3.2HG0149220.1 ... HORVU.MOREX.r3.3HG0248260.1, HORVU.MOREX.r3.4HG0331420.1.CDS1, HORVU.MOREX.r3.6HG0549510.1.CDS1, HORVU.MOREX.r3.6HG0577650.1, HORVU.MOREX.r3.6HG0631730.1, HORVU.MOREX.r3.7HG0726010.1
Poaceae	Lolium multiflorum	9	gene-QYE76_015138, gene-QYE76_019787, gene-QYE76_019788 ... gene-QYE76_021461, gene-QYE76_024224, gene-QYE76_035716, gene-QYE76_039563, gene-QYE76_042829, gene-QYE76_052617
Poaceae	Oryza coarctata	14	Oco01G008280, Oco02G008550, Oco03G001100, Oco03G005370 ... Oco04G001020, Oco04G005440, Oco09G000120, Oco11G016860, Oco11G016870, Oco12G017080, Oco12G017090, Oco13G002580, Oco14G002790, Oco18G012310
Poaceae	Oryza sativa	9	LOC_Os01g18210.1, LOC_Os02g02890.1, LOC_Os02g10970.3 ... LOC_Os05g01270.1, LOC_Os06g49470.1, LOC_Os06g49480.1, LOC_Os07g08190.1, LOC_Os09g39780.2, LOC_Os10g06630.1
Poaceae	Paspalum vaginatum	12	gene-BS78_02G054300, gene-BS78_03G125000, gene-BS78_K326000 ... gene-BS78_04G016100, gene-BS78_04G079600, gene-BS78_04G148500, gene-BS78_09G006400, gene-BS78_09G115100, gene-BS78_10G271700, gene-BS78_10G271800, gene-BS78_10G271900, gene-BS78_K339800
Poaceae	Puccinellia tenuiflora	6	Pt_Chr0202064, Pt_Chr0303684, Pt_Chr0400968, Pt_Chr0603688 ... Pt_Chr0700649, Pt_Chr0700650
Poaceae	Sporobolus alterniflorus	23	Chr01G014240, Chr02G027520, Chr02G033020, Chr05G000830 ... Chr05G000840, Chr05G005240, Chr06G014000, Chr06G032850, Chr06G035830, Chr07G017470, Chr09G006920, Chr0G017850, Chr10G005380, Chr10G021800, Chr11G000780, Chr11G013840, Chr12G022630, Chr13G017500, Chr15G024220, Chr18G003190, Chr22G017090, Chr24G000380, Chr28G001910
Poaceae	Thinopyrum elongatum	10	Tel1E01G020900, Tel2E01G446300, Tel3E01G279500 ... Tel4E01G015200, Tel6E01G164300, Tel6E01G355500, Tel6E01G747100, Tel6E01G747200, Tel6E01G747300, Tel7E01G687300
Poaceae	Triticum dicoccoides	16	gene_TRIDC1AG000840, gene_TRIDC1BG001550 ... gene_TRIDC2AG032470, gene_TRIDC2BG036760, gene_TRIDC3AG020290, gene_TRIDC3BG030560, gene_TRIDC4AG047120, gene_TRIDC4BG001630, gene_TRIDC6AG008440, gene_TRIDC6AG025810, gene_TRIDC6AG059570, gene_TRIDC6BG012730, gene_TRIDC6BG032060, gene_TRIDC6BG070590, gene_TRIDC7AG057180, gene_TRIDC7BG049630
Poaceae	Triticum aestivum	24	TraesCS1A02G007500.1, TraesCS1B02G011100.1 ... TraesCS1D02G000800.2, TraesCS2A02G237700.1, TraesCS2B02G260600.1, TraesCS2D02G244700.1, TraesCS3A02G151100.1, TraesCS3B02G178000.1, TraesCS3D02G159000.1, TraesCS4A02G312600.1, TraesCS4D02G001600.1.cds1, TraesCS6A02G068900.1.cds1, TraesCS6A02G176900.1, TraesCS6A02G405800.1.cds1, TraesCS6A02G405900.1.cds1, TraesCS6B02G093100.2.cds1, TraesCS6B02G208900.2, TraesCS6B02G450300.1.cds1, TraesCS6B02G450400.1.cds1, TraesCS6D02G066700.1.cds1, TraesCS6D02G167200.3, TraesCS7A02G410100.2, TraesCS7B02G309500.2, TraesCS7D02G403300.2
Poaceae	Zea mays	16	Zm00001eb026640_P001, Zm00001eb095470_P001 ... Zm00001eb116950_P001, Zm00001eb181260_P001, Zm00001eb205540_P004, Zm00001eb227450_P001, Zm00001eb227460_P003, Zm00001eb235400_P002, Zm00001eb242390_P001, Zm00001eb242400_P001, Zm00001eb267580_P001, Zm00001eb272660_P002, Zm00001eb300930_P001, Zm00001eb301310_P005, Zm00001eb332450_P001, Zm00001eb356220_P001
Poaceae	Zoysia japonica	9	nbis-gene-24435, nbis-gene-40729, nbis-gene-40730 ... nbis-gene-42335, nbis-gene-42988, nbis-gene-43578, nbis-gene-48838, nbis-gene-52362, nbis-gene-9601
Poaceae	Zoysia macrostachya	10	Zma_g12413, Zma_g14851, Zma_g15852, Zma_g26235, Zma_g29835 ... Zma_g31114, Zma_g33376, Zma_g33377, Zma_g6088, Zma_g9629
Portulacaceae	Portulaca oleracea	11	evm.TU.LG05.167, evm.TU.LG07.830, evm.TU.LG08.1185 ... evm.TU.LG08.448, evm.TU.LG13.11, evm.TU.LG15.102, evm.TU.LG19.1047, evm.TU.LG22.1484, evm.TU.LG22.940, evm.TU.LG24.1049, evm.TU.LG25.1148
Posidoniaceae	Posidonia oceanica	7	gene.Posoc02g12920, gene.Posoc04g14510, gene.Posoc05g13260 ... gene.Posoc06g06960, gene.Posoc06g07010, gene.Posoc06g20380, gene.Posoc07g16070
Rhizophoraceae	Bruguiera sexangula	9	evm.TU.Scaffold_10_RagTag.835, evm.TU.Scaffold_12_RagTag.128 ... evm.TU.Scaffold_13_RagTag.926, evm.TU.Scaffold_15_RagTag.891, evm.TU.Scaffold_17_RagTag.91, evm.TU.Scaffold_1_RagTag.302, evm.TU.Scaffold_4_RagTag.960, evm.TU.Scaffold_5_RagTag.1040, evm.TU.Scaffold_5_RagTag.714
Rhizophoraceae	Carallia pectinifolia	10	nbisL1-mrna-10632, nbisL1-mrna-11313, nbisL1-mrna-13644 ... nbisL1-mrna-23268, nbisL1-mrna-25910, nbisL1-mrna-27084, nbisL1-mrna-27269, nbisL1-mrna-30091, nbisL1-mrna-6018, nbisL1-mrna-7867
Rhizophoraceae	Ceriops tagal	9	nbisL1-mrna-10225, nbisL1-mrna-10697, nbisL1-mrna-11023 ... nbisL1-mrna-11390, nbisL1-mrna-115, nbisL1-mrna-14102, nbisL1-mrna-15666, nbisL1-mrna-3208, nbisL1-mrna-5835
Rhizophoraceae	Ceriops zippeliana	5	nbisL1-mrna-10349, nbisL1-mrna-14605, nbisL1-mrna-16292 ... nbisL1-mrna-3273, nbisL1-mrna-5361
Rhizophoraceae	Kandelia candel	10	add.evm.TU.utg000009l.460, add.evm.TU.utg000012l.75 ... add.evm.TU.utg000016l.27, evm.TU.utg000001l.501, evm.TU.utg000004l.156, evm.TU.utg000006l.336, evm.TU.utg000006l.618, evm.TU.utg000008l.618, evm.TU.utg000013l.49, evm.TU.utg000015l.549
Rhizophoraceae	Kandelia obovata	9	Maker00000875, Maker00002639, Maker00004172, Maker00006605 ... Maker00010991, Maker00012974, Maker00014114, Maker00015601, Maker00017111
Rhizophoraceae	Rhizophora apiculata	9	nbisL1-mrna-10173, nbisL1-mrna-11154, nbisL1-mrna-18580 ... nbisL1-mrna-1978, nbisL1-mrna-19864, nbisL1-mrna-3789, nbisL1-mrna-4453, nbisL1-mrna-6956, nbisL1-mrna-9951
Rhizophoraceae	Rhizophora mangle	9	nbisL1-mrna-16017, nbisL1-mrna-17637, nbisL1-mrna-19746 ... nbisL1-mrna-20857, nbisL1-mrna-22427, nbisL1-mrna-277, nbisL1-mrna-7349, nbisL1-mrna-7882, nbisL1-mrna-9295
Salicaceae	Populus euphratica	16	populus_peu01991, populus_peu01999, populus_peu03957 ... populus_peu04789, populus_peu08753, populus_peu12865, populus_peu15106, populus_peu15358, populus_peu19555, populus_peu20426, populus_peu31431, populus_peu32763, populus_peu33003, populus_peu34791, populus_peu35806, populus_peu36602
Solanaceae	Lycium barbarum	8	gene-LOC132599290, gene-LOC132606220, gene-LOC132606619 ... gene-LOC132608901, gene-LOC132616151, gene-LOC132626204, gene-LOC132626207, gene-LOC132635765
Solanaceae	Solanum chilense	7	SOLCI000331100, SOLCI000574800, SOLCI001443100 ... SOLCI002302200, SOLCI002879100, SOLCI005168800, SOLCI007481100
Solanaceae	Solanum pennellii	7	gene-LOC107004512, gene-LOC107007844, gene-LOC107023543 ... gene-LOC107023825, gene-LOC107026642, gene-LOC107028394, gene-LOC107032430
Tamaricaceae	Reaumuria soongarica	8	STRG.20855_chr08_-, STRG.30197_chr10_+, gene_11829 ... gene_18193, gene_1838, gene_3638, gene_4913, gene_9251
Tamaricaceae	Tamarix chinensis	6	TC04G0607, TC04G2868, TC05G1815, TC10G0082, TC11G1197 ... TC12G0713
Zosteraceae	Zostera marina	9	Zosma01g27250.v3.1, Zosma02g03300.v3.1, Zosma02g03800.v3.1 ... Zosma04g22850.v3.1, Zosma05g32090.v3.1, Zosma05g32100.v3.1, Zosma06g10700.v3.1, Zosma06g14080.v3.1, Zosma1015g00030.v3.1