Basic Information
Locus ID:
CH03.50
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 918801 | 924256 | + | CH03.50 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.05 | 108,183.78 Da | 53.29 | 68.82 | -0.74 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 608 | 821 | 5.78447E-83 | - |
| CDD | cd06410 | PB1_UP2 | 53 | 147 | 1.25109E-37 | - |
| Pfam | PF00564 | PB1 domain | 68 | 147 | 1.7E-12 | IPR000270 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 605 | 821 | 1.0E-48 | IPR001245 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 65 | 154 | 1.63E-17 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 588 | 847 | 1.09E-64 | IPR011009 |
| Gene3D | G3DSA:3.10.20.90 | - | 70 | 148 | 3.3E-7 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 584 | 827 | 2.0E-65 | - |
| SMART | SM00666 | PB1_new | 64 | 149 | 1.6E-20 | IPR000270 |
| SMART | SM00220 | serkin_6 | 602 | 897 | 2.4E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 602 | 873 | 35.4813 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 726 | 738 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 373 | 414 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 856 | 971 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 505 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 19 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 284 | 309 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 457 | 548 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 907 | 939 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 216 | 240 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 506 | 534 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G16270.1 | Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain. | 8.25E-112 |
| RefSeq | XP_034581860.1 | dual specificity protein kinase shkD-like [Setaria viridis] | 0 |
| O64768 | RAF-like serine/threonine-protein kinase 24 OS=Arabidopsis thaliana OX=3702 GN=RAF24 PE=1 SV=1 | 1.53E-103 | |
| TrEMBL | A0A4U6VK56 | Protein kinase domain-containing protein OS=Setaria viridis OX=4556 GN=SEVIR_2G005000v2 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology