Basic Information
Locus ID:
CH03.4838
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 56875655 | 56879088 | - | CH03.4838 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.59 | 62,158.65 Da | 56.14 | 82.67 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 147 | 470 | 2.5E-102 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 141 | 505 | 1.21E-115 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 136 | 482 | 2.5E-129 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 139 | 478 | 1.4E-144 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 141 | 470 | 115.130501 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 366 | 377 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 420 | 441 | 2.1E-43 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 213 | 234 | 2.1E-43 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 367 | 385 | 2.1E-43 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 334 | 351 | 2.1E-43 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 66 | 105 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 21 | 46 | - | - |
| Coils | Coil | Coil | 477 | 504 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G17360.2 | - | 3.15E-181 |
| RefSeq | XP_022680287.1 | kinesin-like protein KIN-12E isoform X3 [Setaria italica] | 0 |
| B9FUF9 | Kinesin-like protein KIN-12E OS=Oryza sativa subsp. japonica OX=39947 GN=KIN12E PE=2 SV=2 | 2.89E-258 | |
| TrEMBL | A0A368Q883 | Kinesin motor domain-containing protein OS=Setaria italica OX=4555 GN=SETIT_2G406300v2 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology