Basic Information
Locus ID:
CH03.4777
Species & Taxonomic ID:
Echinochloa crus-galli & 90397
Genome Assembly:
GWHBDNR00000000
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| CH03 | 56229127 | 56231381 | + | CH03.4777 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.22 | 40,442.93 Da | 47.44 | 103.48 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 90 | 306 | 3.6E-27 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 71 | 359 | 2.0E-55 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 59 | 165 | 6.8E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 166 | 381 | 2.2E-40 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 88 | 381 | 29.389545 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 94 | 116 | - | IPR017441 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 212 | 224 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G33260.1 | Protein kinase superfamily protein. | 4.08E-55 |
| RefSeq | XP_034601170.1 | salt tolerance receptor-like cytoplasmic kinase 1 isoform X2 [Setaria viridis] | 5.04E-180 |
| A2XW02 | Salt tolerance receptor-like cytoplasmic kinase 1 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16820 PE=2 SV=1 | 3.59E-70 | |
| TrEMBL | K3YT61 | Protein kinase domain-containing protein OS=Setaria italica OX=4555 GN=101772578 PE=4 SV=1 | 1.56E-178 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Poaceae | Echinochloa crus-galli | 4 | AH07.148, BH07.3415, BH07.51, CH03.4777 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_2AG0098830, gene-QOZ80_2BG0152310 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.6HG0542320.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_019130, gene-QYE76_019396 |
| Poaceae | Oryza coarctata | 1 | Oco04G000400 |
| Poaceae | Oryza sativa | 1 | LOC_Os02g01730.1 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_04G006700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0200841 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr06G036200, Chr0G010420, Chr0G010730 |
| Poaceae | Thinopyrum elongatum | 1 | Tel6E01G074100 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC6AG002880, gene_TRIDC6BG003870 |
| Poaceae | Triticum aestivum | 2 | TraesCS6A02G024700.1, TraesCS6B02G033600.1 |
| Poaceae | Zea mays | 2 | Zm00001eb209790_P001, Zm00001eb229530_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-52068 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g12048 |